RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ALDOCP09972 364 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 CD1EP15812 388 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 LBPP18428 481 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 IL11P20809 199 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 AGAP20933 346 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 MATN1P21941 496 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 ELAVL4P26378 380 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 IL12AP29459 219 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CHRNB4P30926 498 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 S100A3P33764 101 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SOAT1P35610 550 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 PRIM2P49643 509 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 LHX2P50458 406 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CLDN15P56746 228 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CLDN20P56880 219 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SF3A3Q12874 501 aaKnown RBP eCLIP4.07□□□□□ -1.76
NUP54-206ENST00000508465 CNN3Q15417 329 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 ACSF3Q4G176 576 aaPredicted RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 SLC9B1Q4ZJI4 515 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 TTMPQ5BVD1 217 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SPANXN4Q5MJ08 99 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 AGBL2Q5U5Z8 902 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 ATG16L1Q676U5 607 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CDC73Q6P1J9 531 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SPATA19Q7Z5L4 167 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CROCCP2Q86T23 111 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 COX18Q8N8Q8 333 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CDRT4Q8N9R6 151 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 NAXEQ8NCW5 288 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 ATP6V1C2Q8NEY4 427 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 OR5D16Q8NGK9 328 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 OR4A15Q8NGL6 344 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 FAM110BQ8TC76 370 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 PHF10Q8WUB8 498 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 ASB5Q8WWX0 329 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SMPDL3BQ92485 455 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 RAB8BQ92930 207 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 ZNF524Q96C55 264 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 INTS12Q96CB8 462 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 THOC1Q96FV9 657 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 MS4A4EQ96PG1 132 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 FYTTD1Q96QD9 318 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 OR7D2Q96RA2 312 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 OR52B2Q96RD2 323 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 OR2B2Q9GZK3 357 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 MEAF6Q9HAF1 191 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SLCO1B3Q9NPD5 702 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CHST11Q9NPF2 352 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 SDHAF3Q9NRP4 125 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 ATAD3AQ9NVI7 634 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 THAP1Q9NVV9 213 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 FAM120CQ9NX05 1096 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 QPCTLQ9NXS2 382 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 HAO1Q9UJM8 370 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 MRTO4Q9UKD2 239 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 ZDHHC8Q9ULC8 765 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 FAF1Q9UNN5 650 aaPredicted RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 VDAC3Q9Y277 283 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 KLF2Q9Y5W3 355 aaPredicted RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 WIF1Q9Y5W5 379 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 AKAP9Q99996 3911 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 CSMD2Q7Z408 3487 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 KIAA1549Q9HCM3 1950 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 RNF103-CHMP3A0A140T963 221 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PRSS51A0A1B0GVH4 220 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 OR2M5A3KFT3 312 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CLCA1A8K7I4 914 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 HSPB2A8KAH6 182 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 H0Y3Z8 333 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ZNF195O14628 629 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 HDAC3O15379 428 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SEC14L5O43304 696 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 HCRTR2O43614 444 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 EFNA2O43921 213 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 DIAPH2O60879 1101 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SCN2BO60939 215 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SLC22A3O75751 556 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 TGM6O95932 706 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ACTL6AO96019 429 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 OR12D1P0DN82 309 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 GABRA1P14867 456 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CPN1P15169 458 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 HPGDP15428 266 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ATP6V1C1P21283 382 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 TBXA2RP21731 343 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 TNFSF4P23510 183 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 PPIFP30405 207 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 SRD5A2P31213 254 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 UQCRC1P31930 480 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 CEACAM8P31997 349 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 CHI3L1P36222 383 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 RPL3P39023 403 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 CDKN2CP42773 168 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 ZFP36L2P47974 494 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 SLC6A8P48029 635 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 SUCLG1P53597 346 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 DSCR4P56555 118 aaPredicted RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 LOXL3P58215 753 aa4.06□□□□□ -1.76
NUP54-206ENST00000508465 NANOS2P60321 138 aaKnown RBP4.06□□□□□ -1.76
NUP54-206ENST00000508465 TFF3Q07654 80 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms