RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 HSP90B2PQ58FF3 399 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 ANKRD16Q6P6B7 361 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 OR4F15Q8NGB8 312 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 DYDC1Q8WWB3 177 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 FCRL1Q96LA6 429 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 OBP2BQ9NPH6 170 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 TREM2Q9NZC2 230 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 SH3BP4Q9P0V3 963 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 SLC9A8Q9Y2E8 581 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 TMED5Q9Y3A6 229 aa12.01□□□□□ -0.49
DDR1-260ENST00000507533 SPIN1Q9Y657 262 aaPredicted RBP12.01□□□□□ -0.49
DDR1-260ENST00000507533 TRAV20A0A0B4J274 112 aa12□□□□□ -0.49
DDR1-260ENST00000507533 TMEM129A0AVI4 362 aa12□□□□□ -0.49
DDR1-260ENST00000507533 NPIPB9F8W1W9 429 aa12□□□□□ -0.49
DDR1-260ENST00000507533 AKAP10O43572 662 aa12□□□□□ -0.49
DDR1-260ENST00000507533 DNPH1O43598 174 aa12□□□□□ -0.49
DDR1-260ENST00000507533 PEX11AO75192 247 aa12□□□□□ -0.49
DDR1-260ENST00000507533 TFP02787 698 aa12□□□□□ -0.49
DDR1-260ENST00000507533 HMGN2P05204 90 aaKnown RBP12□□□□□ -0.49
DDR1-260ENST00000507533 IGFBP1P08833 259 aaPredicted RBP12□□□□□ -0.49
DDR1-260ENST00000507533 ADRA2AP08913 450 aa12□□□□□ -0.49
DDR1-260ENST00000507533 GAAP10253 952 aa12□□□□□ -0.49
DDR1-260ENST00000507533 SAGP10523 405 aaPredicted RBP12□□□□□ -0.49
DDR1-260ENST00000507533 EFNA1P20827 205 aaPredicted RBP12□□□□□ -0.49
DDR1-260ENST00000507533 CALCRP30988 508 aa12□□□□□ -0.49
DDR1-260ENST00000507533 GPR6P46095 362 aaPredicted RBP12□□□□□ -0.49
DDR1-260ENST00000507533 OR2B6P58173 313 aa12□□□□□ -0.49
DDR1-260ENST00000507533 RPL38P63173 70 aaKnown RBP12□□□□□ -0.49
DDR1-260ENST00000507533 HGFACQ04756 655 aa12□□□□□ -0.49
DDR1-260ENST00000507533 ATP6AP1LQ52LC2 224 aa12□□□□□ -0.49
DDR1-260ENST00000507533 C6orf136Q5SQH8 315 aa12□□□□□ -0.49
DDR1-260ENST00000507533 DCST2Q5T1A1 773 aa12□□□□□ -0.49
DDR1-260ENST00000507533 CARM1Q86X55 608 aa12□□□□□ -0.49
DDR1-260ENST00000507533 BPIFB2Q8N4F0 458 aa12□□□□□ -0.49
DDR1-260ENST00000507533 NUP37Q8NFH4 326 aa12□□□□□ -0.49
DDR1-260ENST00000507533 LRRC8CQ8TDW0 803 aa12□□□□□ -0.49
DDR1-260ENST00000507533 TMEM234Q8WY98 164 aa12□□□□□ -0.49
DDR1-260ENST00000507533 PPCDCQ96CD2 204 aa12□□□□□ -0.49
DDR1-260ENST00000507533 TUBGCP3Q96CW5 907 aa12□□□□□ -0.49
DDR1-260ENST00000507533 FAM120BQ96EK7 910 aaKnown RBP12□□□□□ -0.49
DDR1-260ENST00000507533 BOD1Q96IK1 185 aa12□□□□□ -0.49
DDR1-260ENST00000507533 ARL5BQ96KC2 179 aa12□□□□□ -0.49
DDR1-260ENST00000507533 LAT2Q9GZY6 243 aa12□□□□□ -0.49
DDR1-260ENST00000507533 TPK1Q9H3S4 243 aa12□□□□□ -0.49
DDR1-260ENST00000507533 ZNF442Q9H7R0 627 aa12□□□□□ -0.49
DDR1-260ENST00000507533 MED4Q9NPJ6 270 aa12□□□□□ -0.49
DDR1-260ENST00000507533 ZCCHC3Q9NUD5 404 aaKnown RBP12□□□□□ -0.49
DDR1-260ENST00000507533 DDX28Q9NUL7 540 aaKnown RBP12□□□□□ -0.49
DDR1-260ENST00000507533 ACER3Q9NUN7 267 aa12□□□□□ -0.49
DDR1-260ENST00000507533 HDGFL3Q9Y3E1 203 aa12□□□□□ -0.49
DDR1-260ENST00000507533 FLVCR1Q9Y5Y0 555 aa12□□□□□ -0.49
DDR1-260ENST00000507533 WNT9BO14905 357 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 DNAJA2O60884 412 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 CECR9P0C854 216 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 PAX7P23759 505 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 ZFP36P26651 326 aaKnown RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 MAPK1P28482 360 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 APOBEC1P41238 236 aaKnown RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 FRKP42685 505 aaPredicted RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 UBE2NP61088 152 aaKnown RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 TBRG1Q3YBR2 411 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 C1QL2Q7Z5L3 287 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 CDK20Q8IZL9 346 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 ADAMTS15Q8TE58 950 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 CKAP2Q8WWK9 683 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 ZNF764Q96H86 408 aaPredicted RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 ANKRD27Q96NW4 1050 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 NUF2Q9BZD4 464 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 RACGAP1Q9H0H5 632 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 REEP4Q9H6H4 257 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 UNKLQ9H9P5 680 aaKnown RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 CTPS2Q9NRF8 586 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 ACSS1Q9NUB1 689 aaPredicted RBP11.99□□□□□ -0.49
DDR1-260ENST00000507533 TMEM45AQ9NWC5 275 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 GIMAP2Q9UG22 337 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 PPIAL4AQ9Y536 164 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 KCNE3Q9Y6H6 103 aa11.99□□□□□ -0.49
DDR1-260ENST00000507533 HDAC3O15379 428 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 TBX19O60806 448 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 BCKDHAP12694 445 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 SDC1P18827 310 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 COL8A2P25067 703 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 H3F3AP84243 136 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 SKP2Q13309 424 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 SMU1Q2TAY7 513 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 ELFN2Q5R3F8 820 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 PDZK1Q5T2W1 519 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 ARFGAP2Q8N6H7 521 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 POMGNT2Q8NAT1 580 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 FNDC5Q8NAU1 212 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 OR1K1Q8NGR3 316 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 PPP1R36Q96LQ0 422 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 MAGEB18Q96M61 343 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 C7orf26Q96N11 449 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 NAA11Q9BSU3 229 aaPredicted RBP11.98□□□□□ -0.49
DDR1-260ENST00000507533 ACTRT3Q9BYD9 372 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 OR11A1Q9GZK7 315 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 AKTIPQ9H8T0 292 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 SEC61A2Q9H9S3 476 aa11.98□□□□□ -0.49
DDR1-260ENST00000507533 MEAF6Q9HAF1 191 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms