RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DCLRE1CQ96SD1 692 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 ATOH8Q96SQ7 321 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 B9D2Q9BPU9 175 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 NAA11Q9BSU3 229 aaPredicted RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 THUMPD3Q9BV44 507 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 TOR3AQ9H497 397 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 RHOJQ9H4E5 214 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 GLIPR2Q9H4G4 154 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 MOV10Q9HCE1 1003 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 NOX4Q9NPH5 578 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 HINT3Q9NQE9 182 aaKnown RBP6.09□□□□□ -1.43
VCAN-207ENST00000507162 NMRK1Q9NWW6 199 aa6.09□□□□□ -1.43
VCAN-207ENST00000507162 ZNF816-ZNF321PA0A0X1KG74 233 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 WI2-2373I1.2A0A1W2PRP0 233 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 SYCE1LA8MT33 242 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 C17orf100A8MU93 164 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 CXorf49A8MYA2 514 aaPredicted RBP6.08□□□□□ -1.44
VCAN-207ENST00000507162 OR7A17O14581 309 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 PCDH7O60245 1069 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 PSMG1O95456 288 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 PMS2P2O95744 297 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 PLATP00750 562 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 MELTFP08582 738 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ACP2P11117 423 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ATP6V1C1P21283 382 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 IVDP26440 423 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 NTSP30990 170 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 GLRXP35754 106 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ARR3P36575 388 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ASMTP46597 345 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 FNTAP49354 379 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 SELENOVP59797 346 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ARF1P84077 181 aaKnown RBP6.08□□□□□ -1.44
VCAN-207ENST00000507162 GALK2Q01415 458 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 BTKQ06187 659 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 PAX8Q06710 450 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 C2orf80Q0P641 193 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 DLG1Q12959 904 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 CBFBQ13951 182 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 HERPUD1Q15011 391 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 TRMT5Q32P41 509 aaKnown RBP6.08□□□□□ -1.44
VCAN-207ENST00000507162 NSUN5P1Q3KNT7 163 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 MMEL1Q495T6 779 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 FAM219BQ5XKK7 198 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 TTC27Q6P3X3 843 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 MDP1Q86V88 176 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 TMEM86BQ8N661 226 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 FAM169BQ8N8A8 192 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 COX18Q8N8Q8 333 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ZIC4Q8N9L1 334 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 CDRT4Q8N9R6 151 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ZSCAN4Q8NAM6 433 aaPredicted RBP6.08□□□□□ -1.44
VCAN-207ENST00000507162 KIF18AQ8NI77 898 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 SNX33Q8WV41 574 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 FAM71F1Q96KD3 344 aaPredicted RBP6.08□□□□□ -1.44
VCAN-207ENST00000507162 UBXN10Q96LJ8 280 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
VCAN-207ENST00000507162 OR11A1Q9GZK7 315 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 NMUR2Q9GZQ4 415 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 PRDM13Q9H4Q3 707 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 ACSS3Q9H6R3 686 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 NMRAL1Q9HBL8 299 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 VPS29Q9UBQ0 182 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 GPR160Q9UJ42 338 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 CAPN6Q9Y6Q1 641 aa6.08□□□□□ -1.44
VCAN-207ENST00000507162 RBMY1BA6NDE4 496 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 RBMY1EA6NEQ0 496 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 TMEM229AB2RXF0 380 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 MBD3O95983 291 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 CLPTM1O96005 669 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 RBMY1DP0C7P1 496 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 CD79AP11912 226 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 BCKDHAP12694 445 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 IGLL1P15814 213 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 LCN1P31025 176 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 MSX2P35548 267 aaPredicted RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 ALDH18A1P54886 795 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 RPL15P61313 204 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 SEC61A1P61619 476 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 RPS23P62266 143 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 POU6F2P78424 691 aaPredicted RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 BST1Q10588 318 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 HSPB3Q12988 150 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 SLC17A1Q14916 467 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 LARS2Q15031 903 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 DUSP5Q16690 384 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 PCGF3Q3KNV8 242 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 ATP6AP1LQ52LC2 224 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 KLHL26Q53HC5 615 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 CAVIN1Q6NZI2 390 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 CDC73Q6P1J9 531 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 PGBD2Q6P3X8 592 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 ZNF551Q7Z340 670 aaPredicted RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 GPAT4Q86UL3 456 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 OR4S1Q8NGB4 309 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 MUC7Q8TAX7 377 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 MAGEE2Q8TD90 523 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms