RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SERPINA6P08185 405 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FGF4P08620 206 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 HIST1H2AGP0C0S8 130 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 KRTAP1-4P0C5Y4 121 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CISD3P0C7P0 127 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 GPR89BP0CG08 455 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 DUX4L4P0CJ87 422 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC35E2BP0CK96 405 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CCDC166P0CW27 439 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 VCLP18206 1134 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 AOC1P19801 751 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 IMPDH1P20839 514 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 RPS3P23396 243 aaKnown RBP eCLIP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ACKR3P25106 362 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 PKLRP30613 574 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FOXN2P32314 431 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 RGRP47804 291 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC1A6P48664 564 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SPINT3P49223 89 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 HNMTP50135 292 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 RPL14P50914 215 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SGSHP51688 502 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF140P52738 457 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CRYBA2P53672 197 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TAS2R39P59534 338 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 HERVK_113P63132 956 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 NTHL1P78549 312 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC3A1Q07837 685 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 IFT88Q13099 833 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF146Q15072 292 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ACKR1Q16570 336 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 KCTD19Q17RG1 926 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF674Q2M3X9 581 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 HNRNPA1L2Q32P51 320 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 MS4A18Q3C1V0 323 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FUT11Q495W5 492 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TCEAL5Q5H9L2 206 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 LDLRAP1Q5SW96 308 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 N4BP2L1Q5TBK1 243 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SEL1L3Q68CR1 1132 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 NEK5Q6P3R8 708 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CNSTQ6PJW8 725 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ZYG11AQ6WRX3 759 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FRA10AC1Q70Z53 315 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 GET4Q7L5D6 327 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ADGRD2Q7Z7M1 963 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ADAMTSL2Q86TH1 951 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 RALGPS2Q86X27 583 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 HPS6Q86YV9 775 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TUSC5Q8IXB3 177 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 OR4N5Q8IXE1 308 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 LRRC34Q8IZ02 419 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FAM9CQ8IZT9 166 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TCAIMQ8N3R3 496 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TRAM1L1Q8N609 369 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ITFG1Q8TB96 612 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 MCOLN3Q8TDD5 553 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ASZ1Q8WWH4 475 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ING5Q8WYH8 240 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 PTP4A1Q93096 173 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CMTM5Q96DZ9 223 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 L3HYPDHQ96EM0 354 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 DNAJC1Q96KC8 554 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 RILPQ96NA2 401 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FOPNLQ96NB1 174 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 VPS35Q96QK1 796 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 KLF6Q99612 283 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 COPS8Q99627 209 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 P2RY13Q9BPV8 354 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 C17orf62Q9BQA9 187 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 PINK1Q9BXM7 581 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ERVK-6Q9BXR3 956 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 NUSAP1Q9BXS6 441 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 DERL2Q9GZP9 239 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 DRC3Q9H069 523 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM245Q9H330 911 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 MMADHCQ9H3L0 296 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 C8orf33Q9H7E9 229 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 COPS7BQ9H9Q2 264 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 RNPEPL1Q9HAU8 725 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 UGT1A7Q9HAW7 530 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 UGT1A10Q9HAW8 530 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 UGT1A8Q9HAW9 530 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 IL26Q9NPH9 171 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SAR1AQ9NR31 198 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 FBXO6Q9NRD1 293 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SMOXQ9NWM0 555 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 UTP6Q9NYH9 597 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM216Q9P0N5 145 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC17A7Q9P2U7 560 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC2A6Q9UGQ3 507 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 BCAP29Q9UHQ4 241 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 MUTYHQ9UIF7 546 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CRLS1Q9UJA2 301 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 GNPTGQ9UJJ9 305 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 NCKAP1Q9Y2A7 1128 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 ARL5AQ9Y689 179 aa2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 PDCD11Q14690 1871 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-205ENST00000506779 CROCCQ5TZA2 2017 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms