RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FOXG1P55316 489 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 COPZ1P61923 177 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 BSPH1Q075Z2 132 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 BNIP2Q12982 314 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 CEACAM7Q14002 265 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 PPA1Q15181 289 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ADRM1Q16186 407 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF672Q499Z4 452 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 AGKQ53H12 422 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF311Q5JNZ3 666 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 OTUD3Q5T2D3 398 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 GCNT6Q5T4J0 391 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 REEP3Q6NUK4 255 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 DHRS4L2Q6PKH6 230 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 C6orf89Q6UWU4 347 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 COMTD1Q86VU5 262 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 P3H2Q8IVL5 708 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 CADM2Q8N3J6 435 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 DPP10Q8N608 796 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 TMEM99Q8N816 258 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 NFKBIDQ8NI38 313 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 STK35Q8TDR2 534 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 DYDC1Q8WWB3 177 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 AKAP1Q92667 903 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 MUS81Q96NY9 551 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 CPPED1Q9BRF8 314 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 SF3B5Q9BWJ5 86 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 TRIM2Q9C040 744 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 GSX1Q9H4S2 264 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 TMEM38AQ9H6F2 299 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 SLC7A10Q9NS82 523 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ARGLU1Q9NWB6 273 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 ASB6Q9NWX5 421 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 TAS2R16Q9NYV7 291 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 SLC25A15Q9Y619 301 aa7.99□□□□□ -1.13
PDLIM5-209ENST00000506632 CSPG4Q6UVK1 2322 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 SHISA9B4DS77 424 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 FTCDNL1E5RQL4 147 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 RAD51DO75771 328 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 AKR7A3O95154 331 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 INHBBP09529 407 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 NCF2P19878 526 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 HOXC5Q00444 222 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 CDK6Q00534 326 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 EGR4Q05215 589 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 FAPQ12884 760 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 CAPRIN1Q14444 709 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 OR7A5Q15622 319 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 STK11Q15831 433 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 GABRA6Q16445 453 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 RUNDC3AQ59EK9 446 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 TSPO2Q5TGU0 170 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 C1orf140Q5VVS0 124 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 ALKBH2Q6NS38 261 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 CASP12Q6UXS9 341 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 YTHDF3Q7Z739 585 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 BIVMQ86UB2 503 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 UBE2J2Q8N2K1 259 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 LSMEM1Q8N8F7 131 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 KBTBD8Q8NFY9 601 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 OR9K2Q8NGE7 335 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 OR52E4Q8NGH9 312 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 TSPEARQ8WU66 669 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 TMEM171Q8WVE6 324 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 NEUROG1Q92886 237 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 FBXW5Q969U6 566 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 MUCL1Q96DR8 90 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 PERPQ96FX8 193 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 BOD1Q96IK1 185 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 ZNF385AQ96PM9 386 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 PTDSS2Q9BVG9 487 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 RABEP2Q9H5N1 569 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 CXorf56Q9H5V9 222 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 C12orf10Q9HB07 376 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 CACYBPQ9HB71 228 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 PARPBPQ9NWS1 579 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 LEF1Q9UJU2 399 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 CORO2BQ9UQ03 480 aa7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 FN1P02751 2386 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-209ENST00000506632 NIPBLQ6KC79 2804 aaeCLIP7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 IGKV1D-42A0A075B6H8 117 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 CIB4A0PJX0 185 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 CCT8L1PA6NM43 557 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 C5orf58C9J3I9 102 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 CLOCKO15516 846 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 TPST1O60507 370 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 VAMP5O95183 116 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 SOD3P08294 240 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 HOXB4P17483 251 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 HTR2AP28223 471 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 PCBP3P57721 371 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 RPS4XP62701 263 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 SCARB2Q14108 478 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 PGGHGQ32M88 737 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 GLIPR1L2Q4G1C9 344 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 C1QTNF12Q5T7M4 302 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 OR7E24Q6IFN5 339 aa7.97□□□□□ -1.13
PDLIM5-209ENST00000506632 DTX2Q86UW9 622 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms