RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 PCSK6P29122 969 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 ACVR1BP36896 505 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 SLC25A3Q00325 362 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 KRTAP1-1Q07627 177 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 LARS2Q15031 903 aaKnown RBP12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 TTMPQ5BVD1 217 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 BLOC1S3Q6QNY0 202 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 B3GLCTQ6Y288 498 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 DNM1P46Q6ZS02 220 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 COMTD1Q86VU5 262 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 GTPBP3Q969Y2 492 aaKnown RBP12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 TMEM45BQ96B21 275 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 TRMT61AQ96FX7 289 aaKnown RBP12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 PRR14Q9BWN1 585 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 AMBRA1Q9C0C7 1298 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 SLCO5A1Q9H2Y9 848 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 A4GALTQ9NPC4 353 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 TCF7L2Q9NQB0 619 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 SLC17A5Q9NRA2 495 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 THUMPD1Q9NXG2 353 aaKnown RBP12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 B3GALT5Q9Y2C3 310 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 SLC9A8Q9Y2E8 581 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 IFT52Q9Y366 437 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
CDC42SE2-209ENST00000506419 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 TMEM229AB2RXF0 380 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 UQCRBP14927 111 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 PTAFRP25105 342 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 CDH11P55287 796 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 COPZ1P61923 177 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 EGR4Q05215 589 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 LGALS3BPQ08380 585 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 LRIF1Q5T3J3 769 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 C1orf140Q5VVS0 124 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 PRAMEF8Q5VWM4 474 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 PRAMEF7Q5VXH5 474 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 CREB3L2Q70SY1 520 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 SSX8Q7RTT4 187 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 PRIMA1Q86XR5 153 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 EPHX4Q8IUS5 362 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 KDM8Q8N371 416 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 RADILQ96JH8 1075 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 CCDC28BQ9BUN5 200 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 PTDSS2Q9BVG9 487 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 SF3B5Q9BWJ5 86 aaKnown RBP12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 GRIP2Q9C0E4 1043 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 UPB1Q9UBR1 384 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 DCTN4Q9UJW0 460 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
CDC42SE2-209ENST00000506419 TRBV5-3A0A0A0MS03 114 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 FTCDNL1E5RQL4 147 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 M0R1B8 84 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 TPST1O60507 370 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 MPGP29372 298 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 TTKP33981 857 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 AQP5P55064 265 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 TMEM225Q6GV28 225 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 C11orf71Q6IPW1 123 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 TMEM108Q6UXF1 575 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 LINGO2Q7L985 606 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 STK35Q8TDR2 534 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 LRRC8CQ8TDW0 803 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 SPDL1Q96EA4 605 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 KTI12Q96EK9 354 aaPredicted RBP12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 WFDC6Q9BQY6 131 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 REG4Q9BYZ8 158 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 ADPRHL2Q9NX46 363 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 VAPAQ9P0L0 249 aa12.61□□□□□ -0.39
CDC42SE2-209ENST00000506419 POLR3GO15318 223 aaPredicted RBP12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 ARAFP10398 606 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 HTR2AP28223 471 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 SELENOPP49908 381 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 FADDQ13158 208 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 VEZF1Q14119 521 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 ADRM1Q16186 407 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 HIKESHIQ53FT3 197 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 KLHL17Q6TDP4 642 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 DLEU7Q6UYE1 221 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 GPAT4Q86UL3 456 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 GOLGA6L1Q8N7Z2 621 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 NFKBIDQ8NI38 313 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 BBS10Q8TAM1 723 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 BOD1Q96IK1 185 aa12.6□□□□□ -0.39
CDC42SE2-209ENST00000506419 DHRS9Q9BPW9 319 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms