RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 C10orf120Q5SQS8 335 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 OR2G6Q5TZ20 316 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 TTC23Q5W5X9 447 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 TPGS2Q68CL5 300 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 CENPPQ6IPU0 288 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 C11orf71Q6IPW1 123 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 MOB3BQ86TA1 216 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 FAM133AQ8N9E0 248 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 OR1F12Q8NHA8 337 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 ZNF606Q8WXB4 792 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 PIGCQ92535 297 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 MRPS31Q92665 395 aaKnown RBP2.32□□□□□ -2.04
CHD1-203ENST00000505657 N4BP2L2Q92802 583 aaPredicted RBP2.32□□□□□ -2.04
CHD1-203ENST00000505657 PELI1Q96FA3 418 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 TIMD4Q96H15 378 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 SENP8Q96LD8 212 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 NRIP2Q9BQI9 281 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 NIPSNAP3BQ9BS92 247 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 GON7Q9BXV9 100 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 C20orf85Q9H1P6 137 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 VCX2Q9H322 139 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 RAB18Q9NP72 206 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 NUDT15Q9NV35 164 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 RNF14Q9UBS8 474 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 PTBP2Q9UKA9 531 aaKnown RBP2.32□□□□□ -2.04
CHD1-203ENST00000505657 CLEC4AQ9UMR7 237 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 RABL2BQ9UNT1 228 aa2.32□□□□□ -2.04
CHD1-203ENST00000505657 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 SYNJ2BP-COX16A0A087WUM0 186 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 IGHV3-64DA0A0J9YX35 117 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 LRP5LA4QPB2 252 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 TRIM64CA6NLI5 447 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 NPIPA7E9PJI5 369 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 TMX2-CTNND1H3BSU7 103 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 BTN3A3O00478 584 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 RHOBTB1O94844 696 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 ADCY5O95622 1261 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 P04436 131 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 LGALS2P05162 132 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 GIPP09681 153 aaPredicted RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 NPIPA8P0DM63 369 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 PCMT1P22061 227 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 YWHABP31946 246 aaKnown RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 PAX5Q02548 391 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 GPM6BQ13491 265 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 LRRC23Q53EV4 343 aaPredicted RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 CEP55Q53EZ4 464 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 C6orf89Q6UWU4 347 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 ZFP2Q6ZN57 461 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 TMEM61Q8N0U2 210 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 TMEM123Q8N131 208 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 FTMTQ8N4E7 242 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 OR51G1Q8NGK1 321 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 OR9G1Q8NH87 305 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 FANK1Q8TC84 345 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 SHC3Q92529 594 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 STARD4Q96DR4 205 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 NAT9Q9BTE0 207 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 PLA2G2FQ9BZM2 168 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 SELENOIQ9C0D9 397 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 NT5C3AQ9H0P0 336 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 SUDS3Q9H7L9 328 aaPredicted RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 PLGRKTQ9HBL7 147 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 POPDC2Q9HBU9 364 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 NPIPA1Q9UND3 350 aa2.31□□□□□ -2.04
CHD1-203ENST00000505657 MRPS7Q9Y2R9 242 aaKnown RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 RRP15Q9Y3B9 282 aaKnown RBP2.31□□□□□ -2.04
CHD1-203ENST00000505657 MBLAC1A4D2B0 266 aaPredicted RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 NKX2-6A6NCS4 301 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 PRRG1O14668 218 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 MAGEB4O15481 346 aaPredicted RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 SNNO75324 88 aaPredicted RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 IL1BP01584 269 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 IGHG4P01861 327 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 OPN1MWP04001 364 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 OPN1MW2P0DN77 364 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 OPN1MW3P0DN78 364 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 ICAM2P13598 275 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 CRISP2P16562 243 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 VDAC2P45880 294 aaPredicted RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 PPT1P50897 306 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 KPNA2P52292 529 aaKnown RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 CRISP3P54108 245 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 C1orf61Q13536 156 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 RIPK1Q13546 671 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 PTGES3Q15185 160 aaKnown RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 TMIGD1Q6UXZ0 262 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 SYT10Q6XYQ8 523 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 VSTM4Q8IW00 320 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 ZNF679Q8IYX0 411 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 CLEC4FQ8N1N0 589 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 ZCCHC7Q8N3Z6 543 aaKnown RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 ANKFN1Q8N957 763 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 EIF1ADQ8N9N8 165 aaKnown RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 STEAP2Q8NFT2 490 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 OR10G3Q8NGC4 313 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 OR4K14Q8NGD5 310 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 TRMT10AQ8TBZ6 339 aaKnown RBP2.3□□□□□ -2.04
CHD1-203ENST00000505657 RLN3Q8WXF3 142 aa2.3□□□□□ -2.04
CHD1-203ENST00000505657 NDRG1Q92597 394 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms