RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 KIF18BQ86Y91 864 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR14L1PQ8NHC6 308 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 SH3YL1Q96HL8 342 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 IL20Q9NYY1 176 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 RCE1Q9Y256 329 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CDC42EP2O14613 210 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 EIF1BO60739 113 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 KLK2P20151 261 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 MXRA7P84157 204 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 SF3B4Q15427 424 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 C3AR1Q16581 482 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 ARMC4Q5T2S8 1044 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 NAXEQ8NCW5 288 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 PFN4Q8NHR9 129 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 FBLIM1Q8WUP2 373 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 GMPPAQ96IJ6 420 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 SLC25A19Q9HC21 320 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM5Q9Y2B1 443 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CPSF4LA6NMK7 179 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR2T1O43869 369 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 TGM6O95932 706 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 PRB1P04280 392 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 FPR1P21462 350 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 MASP1P48740 699 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 RNF144AP50876 292 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CYP2R1Q6VVX0 501 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 SVOPLQ8N434 492 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 C9orf106Q8NAJ2 232 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF629Q9UEG4 869 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 VDAC3Q9Y277 283 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 NPIPA5E9PKD4 350 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CLOCKO15516 846 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 LDLRP01130 860 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 TCN1P20061 433 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 ACVR2AP27037 513 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 KIR2DL2P43627 348 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CSNK2A1P68400 391 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 TSPAN31Q12999 210 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR10Q1Q8NGQ4 319 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 CHST11Q9NPF2 352 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 C8orf4Q9NR00 106 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 NPIPA1Q9UND3 350 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 H0YC42 278 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 H0YJX3 145 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 BHLHE40O14503 412 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 TNFSF11O14788 317 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 PIP5K1CO60331 668 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 VAMP5O95183 116 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 POU3F2P20265 443 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 AGTR1P30556 359 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 TPD52P55327 224 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 NRN1LQ496H8 165 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF362Q5T0B9 420 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 OGFRL1Q5TC84 451 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 RASSF6Q6ZTQ3 369 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 PXKQ7Z7A4 578 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 SFXN2Q96NB2 322 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 SFXN3Q9BWM7 321 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 NRIP3Q9NQ35 241 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 SERINC1Q9NRX5 453 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 AP4S1Q9Y587 144 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 A0A1B0GUH1 482 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 ADAP00813 363 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 FCGR2AP12318 317 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 MLLT10P55197 1068 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 NUP107P57740 925 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 CDK5Q00535 292 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 SLC25A30Q5SVS4 291 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 CYP4Z1Q86W10 505 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 MEIOBQ8N635 442 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR5M1Q8NGP8 315 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 PIGXQ8TBF5 258 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 MCUR1Q96AQ8 359 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 TPD52L3Q96J77 140 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 TM9SF2Q99805 663 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 PIGMQ9H3S5 423 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 C6orf203Q9P0P8 240 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 SH3GLB1Q9Y371 365 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 AKAP9Q99996 3911 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 A0A0G2JNJ9 132 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 FAM47E-STBD1D6RA91 191 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 RRM2P31350 389 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 EXOC3L2Q2M3D2 409 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 C3orf36Q3SXR2 165 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 WLSQ5T9L3 541 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 TTC33Q6PID6 262 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 CREB3L2Q70SY1 520 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR5J2Q8NH18 312 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR5K1Q8NHB7 308 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 CENPNQ96H22 339 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 NMNAT2Q9BZQ4 307 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR11A1Q9GZK7 315 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 YY1AP1Q9H869 796 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 VSX1Q9NZR4 365 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 Q9UFV3 132 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 FLVCR1Q9Y5Y0 555 aa7.37□□□□□ -1.23
CDC42SE2-208ENST00000505065 ARPC3O15145 178 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms