RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 HOXB6P17509 224 aaKnown RBP16.25■□□□□ 0.19
DDR1-254ENST00000504679 GTF2E2P29084 291 aaKnown RBP16.25■□□□□ 0.19
DDR1-254ENST00000504679 CTBP2P56545 445 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 SMIM11AP58511 58 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 H3F3AP84243 136 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 RASGEF1BQ0VAM2 473 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 PAQR6Q6TCH4 344 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 WDR88Q6ZMY6 472 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 RRM2BQ7LG56 351 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 TSEN54Q7Z6J9 526 aaKnown RBP16.25■□□□□ 0.19
DDR1-254ENST00000504679 ZDHHC21Q8IVQ6 265 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 OFCC1Q8IZS5 231 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 GCNT2Q8N0V5 402 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 C10orf53Q8N6V4 93 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 NAXEQ8NCW5 288 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 LILRB4Q8NHJ6 448 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 RNF128Q8TEB7 428 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 TMEM239Q8WW34 195 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 GMPPAQ96IJ6 420 aaPredicted RBP16.25■□□□□ 0.19
DDR1-254ENST00000504679 ZNF426Q9BUY5 554 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 KLHL4Q9C0H6 718 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 NMNAT1Q9HAN9 279 aaPredicted RBP16.25■□□□□ 0.19
DDR1-254ENST00000504679 GP6Q9HCN6 339 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 PCNX1Q96RV3 2341 aa16.25■□□□□ 0.19
DDR1-254ENST00000504679 HELZ2Q9BYK8 2649 aaKnown RBP16.25■□□□□ 0.19
DDR1-254ENST00000504679 HTR3EA5X5Y0 456 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 SMAD9O15198 467 aaKnown RBP16.24■□□□□ 0.19
DDR1-254ENST00000504679 H1F0P07305 194 aaKnown RBP16.24■□□□□ 0.19
DDR1-254ENST00000504679 FOXF2Q12947 444 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 TMEM225Q6GV28 225 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 FAM214BQ7L5A3 538 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 PIWIL3Q7Z3Z3 882 aaKnown RBP16.24■□□□□ 0.19
DDR1-254ENST00000504679 YTHDF3Q7Z739 585 aaKnown RBP16.24■□□□□ 0.19
DDR1-254ENST00000504679 SPATA24Q86W54 205 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 PIK3C3Q8NEB9 887 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 PIGXQ8TBF5 258 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 TMEM255BQ8WV15 326 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 PIP5K1AQ99755 562 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 TACO1Q9BSH4 297 aaKnown RBP16.24■□□□□ 0.19
DDR1-254ENST00000504679 PTDSS2Q9BVG9 487 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 SFXN3Q9BWM7 321 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 ANKRD19PQ9H560 264 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
DDR1-254ENST00000504679 KLHL9Q9P2J3 617 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 EMC9Q9Y3B6 208 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 MED31Q9Y3C7 131 aa16.24■□□□□ 0.19
DDR1-254ENST00000504679 NCOA6Q14686 2063 aaPredicted RBP16.23■□□□□ 0.19
DDR1-254ENST00000504679 TENM4Q6N022 2769 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 FTCDNL1E5RQL4 147 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 CIB2O75838 187 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 DIRAS1O95057 198 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 PRSS23O95084 383 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 AKR7A3O95154 331 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 MT-ATP6P00846 226 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 MT-ND1P03886 318 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 YES1P07947 543 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 PDK3Q15120 406 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 IQCCQ4KMZ1 466 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 TMEM201Q5SNT2 666 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 OTUD3Q5T2D3 398 aaPredicted RBP16.23■□□□□ 0.19
DDR1-254ENST00000504679 C1orf146Q5VVC0 180 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 CCDC103Q8IW40 242 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 RNF113BQ8IZP6 322 aaKnown RBP16.23■□□□□ 0.19
DDR1-254ENST00000504679 TMEM99Q8N816 258 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 CNEP1R1Q8N9A8 125 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 ABHD3Q8WU67 409 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 ASPNQ9BXN1 380 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 KCNJ16Q9NPI9 418 aa16.23■□□□□ 0.19
DDR1-254ENST00000504679 GCN1Q92616 2671 aaKnown RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 A0A1W2PNV4 684 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 A0A1W2PRQ8 180 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 DHRS12A0PJE2 317 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 KPNA4O00629 521 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 SS18L1O75177 396 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 VAMP5O95183 116 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 GADD45GO95257 159 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 CLDN14O95500 239 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 CH25HO95992 272 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 IGF2P01344 180 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 BGLAPP02818 100 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 HIST1H2ABP04908 130 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 RAP2AP10114 183 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 PTNP21246 168 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 BMP5P22003 454 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 CBLP22681 906 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 KIR2DL2P43627 348 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 LTBQ06643 244 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 DGCR6Q14129 220 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 SLC25A35Q3KQZ1 300 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 H1FNTQ75WM6 255 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 HIST3H2AQ7L7L0 130 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 MAMDC2Q7Z304 686 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 LSRQ86X29 649 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 LIX1LQ8IVB5 337 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 CDK20Q8IZL9 346 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 CANT1Q8WVQ1 401 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 ACOT11Q8WXI4 607 aaPredicted RBP16.22■□□□□ 0.19
DDR1-254ENST00000504679 HIST1H2ACQ93077 130 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 PIGMQ9H3S5 423 aa16.22■□□□□ 0.19
DDR1-254ENST00000504679 MEPEQ9NQ76 525 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms