RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 SLC7A13Q8TCU3 470 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 PYDC1Q8WXC3 89 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF775Q96BV0 537 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF347Q96SE7 839 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 VKORC1Q9BQB6 163 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF426Q9BUY5 554 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 TAPBPLQ9BX59 468 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 CALHM2Q9HA72 323 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 KLHL13Q9P2N7 655 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 CD8B2A6NJW9 211 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 FTCDNL1E5RQL4 147 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 TNFRSF11BO00300 401 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 CST1P01037 141 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 IFI30P13284 250 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 MAKP20794 623 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 FKBP2P26885 142 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 GRPRP30550 384 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 PTGER4P35408 488 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 MAP2K6P52564 334 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 IST1P53990 364 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 ACTR3P61158 418 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 CSNK2A1P68400 391 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 SLC35A1P78382 337 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 ADORA2A-AS1P86434 159 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 FOXF2Q12947 444 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 OR2T5Q6IEZ7 315 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 FCRLAQ7L513 359 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 SLC46A3Q7Z3Q1 461 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 CCDC71Q8IV32 467 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 NRMQ8IXM6 262 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 KDM8Q8N371 416 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 PAPD5Q8NDF8 572 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 OR2T29Q8NH02 315 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 MFSD8Q8NHS3 518 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 ABHD3Q8WU67 409 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 ACOT11Q8WXI4 607 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 WNT2BQ93097 391 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 CPNE4Q96A23 557 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 INTS12Q96CB8 462 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 HS6ST2Q96MM7 605 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 EPYCQ99645 322 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 FUZQ9BT04 418 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 TIGARQ9NQ88 270 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 MCTS1Q9ULC4 181 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 MED31Q9Y3C7 131 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 U3KQV3 271 aa11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 PHF3Q92576 2039 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-212ENST00000504380 MED12LQ86YW9 2145 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 A0A0G2JNJ9 132 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 A0A1B0GUH1 482 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 A0A1W2PRQ8 180 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 MBD3L4A6NDZ8 208 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 MBD3L3A6NE82 208 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 MBD3L5A6NJ08 208 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 M0R082 166 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 ENTPD5O75356 428 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 HOXD4P09016 255 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 GPR4P46093 362 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 SIRPAP78324 504 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 DGCR6Q14129 220 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 SF3B4Q15427 424 aaKnown RBP eCLIP11.84□□□□□ -0.513e-6■□□□□ 10
PDLIM7-212ENST00000504380 ZNF74Q16587 644 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 OTUD3Q5T2D3 398 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 FAM69AQ5T7M9 428 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 MBOAT2Q6ZWT7 520 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 TMEM179BQ7Z7N9 219 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 OR4C15Q8NGM1 316 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 MBD3L2Q8NHZ7 208 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF417Q8TAU3 575 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 POP5Q969H6 163 aaKnown RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 SGTBQ96EQ0 304 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 CCDC120Q96HB5 630 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 ALPK1Q96QP1 1244 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 PAQR5Q9NXK6 330 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 Q9UFV3 132 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF175Q9Y473 711 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 LYVE1Q9Y5Y7 322 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 DOCK7Q96N67 2140 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 LRRK2Q5S007 2527 aa11.84□□□□□ -0.51
PDLIM7-212ENST00000504380 SH3PXD2BA1X283 911 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 GNGT2O14610 69 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 OR7A10O76100 309 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 RNF224P0DH78 156 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 TMIGD3P0DMS9 266 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 CEACAM8P31997 349 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 LIMS1P48059 325 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 P2RY4P51582 365 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 PER3P56645 1201 aa11.83□□□□□ -0.52
PDLIM7-212ENST00000504380 SMIM11AP58511 58 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms