RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 NAA20P61599 178 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 FOXL1Q12952 345 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 ARHGAP11BQ3KRB8 267 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 AP1ARQ63HQ0 302 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 RNF165Q6ZSG1 346 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 C1QL2Q7Z5L3 287 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 MOAP1Q96BY2 351 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 ZNF317Q96PQ6 595 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-236ENST00000498808 SF3B5Q9BWJ5 86 aaKnown RBP13.44□□□□□ -0.26
HDAC6-236ENST00000498808 TMPRSS13Q9BYE2 586 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 OSGIN1Q9UJX0 560 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 SLC35A3Q9Y2D2 325 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 TMED7Q9Y3B3 224 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 FIS1Q9Y3D6 152 aa13.44□□□□□ -0.26
HDAC6-236ENST00000498808 A0A087WUV0 522 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 CLDN24A6NM45 220 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 AP3D1O14617 1153 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 ZNF208O43345 1280 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 UPK3AO75631 287 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 KRT33AO76009 404 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 AKR7A3O95154 331 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 CBR1P16152 277 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 MATN1P21941 496 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 ACHEP22303 614 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 IDH2P48735 452 aaKnown RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 HBA1P69905 142 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 SNTB2Q13425 540 aaKnown RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 LSM12Q3MHD2 195 aaKnown RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 SLC9B1Q4ZJI4 515 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 CFAP157Q5JU67 520 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 TYW3Q6IPR3 259 aaKnown RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 HMGN2P46Q86SG4 172 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 CLEC4FQ8N1N0 589 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 TEX29Q8N6K0 151 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 YIPF5Q969M3 257 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 DDIT4LQ96D03 193 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 MRPL37Q9BZE1 423 aaKnown RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 EXOSC3Q9NQT5 275 aaKnown RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 ZNF275Q9NSD4 429 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-236ENST00000498808 GIMAP2Q9UG22 337 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 VWFP04275 2813 aa13.43□□□□□ -0.26
HDAC6-236ENST00000498808 ZNF503-AS2A6NEH8 195 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 AQP7P3A6NL99 342 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 DUXAA6NLW8 204 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 AZIN1O14977 448 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 SYNGR3O43761 229 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 ADRA2CP18825 462 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 TCN1P20061 433 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-236ENST00000498808 SOAT1P35610 550 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 RPL3P39023 403 aaKnown RBP13.42□□□□□ -0.26
HDAC6-236ENST00000498808 HTR3AP46098 478 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 POLR2HP52434 150 aaKnown RBP13.42□□□□□ -0.26
HDAC6-236ENST00000498808 DNAJB13P59910 316 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 PTGR1Q14914 329 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 KRT80Q6KB66 452 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 C8orf74Q6P047 294 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-236ENST00000498808 GPAT4Q86UL3 456 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 ACMSDQ8TDX5 336 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 RDH5Q92781 318 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 PMM1Q92871 262 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 COQ8BQ96D53 544 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 ZG16BQ96DA0 208 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 PIF1Q9H611 641 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 NOX3Q9HBY0 568 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 MOV10Q9HCE1 1003 aaKnown RBP13.42□□□□□ -0.26
HDAC6-236ENST00000498808 REV1Q9UBZ9 1251 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 CMAHPQ9Y471 501 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 PPIAL4AQ9Y536 164 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 DNAJC15Q9Y5T4 150 aa13.42□□□□□ -0.26
HDAC6-236ENST00000498808 LIPT2A6NK58 231 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 M0R233 179 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 CFLARO15519 480 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 BCL10O95999 233 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 PROCP04070 461 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 HOXB1P14653 301 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-236ENST00000498808 TACR3P29371 465 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 P2RY4P51582 365 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 ETF1P62495 437 aaKnown RBP13.41□□□□□ -0.26
HDAC6-236ENST00000498808 FUT5Q11128 374 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 NPRL3Q12980 569 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 CEACAM7Q14002 265 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 DAG1Q14118 895 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 FAM153CQ494X1 144 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 FRRS1Q6ZNA5 592 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 C16orf62Q7Z3J2 963 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 C6orf120Q7Z4R8 191 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 RIBC1Q8N443 379 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-236ENST00000498808 BPIFB2Q8N4F0 458 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 ARFGAP2Q8N6H7 521 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 KRTCAP2Q8N6L1 136 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 OIT3Q8WWZ8 545 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 CNOT9Q92600 299 aaKnown RBP13.41□□□□□ -0.26
HDAC6-236ENST00000498808 FMO2Q99518 471 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 ATAD3AQ9NVI7 634 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 WDR45Q9Y484 360 aa13.41□□□□□ -0.26
HDAC6-236ENST00000498808 NOTCH1P46531 2555 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 TMEM229AB2RXF0 380 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 TMEM114B3SHH9 223 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 PPIHO43447 177 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms