RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TCN1P20061 433 aaPredicted RBP10.07□□□□□ -0.8
CDK9-205ENST00000498339 CASQ1P31415 396 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 CAPZA2P47755 286 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 POLR2HP52434 150 aaKnown RBP10.07□□□□□ -0.8
CDK9-205ENST00000498339 ARFIP2P53365 341 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 FOXL1Q12952 345 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 DAG1Q14118 895 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 OR7A5Q15622 319 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 C3orf36Q3SXR2 165 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 ATAD3BQ5T9A4 648 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 NIPAL3Q6P499 406 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 CARM1Q86X55 608 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 GSPT2Q8IYD1 628 aaKnown RBP10.07□□□□□ -0.8
CDK9-205ENST00000498339 CLEC4FQ8N1N0 589 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 PMM1Q92871 262 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 ZNF350Q9GZX5 532 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 CRLF2Q9HC73 371 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 DDX28Q9NUL7 540 aaKnown RBP10.07□□□□□ -0.8
CDK9-205ENST00000498339 CMAHPQ9Y471 501 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 WDR45Q9Y484 360 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 PPIAL4AQ9Y536 164 aa10.07□□□□□ -0.8
CDK9-205ENST00000498339 IGHV2OR16-5A0A0B4J2B6 119 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 PIP5K1BO14986 540 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 SYNGR3O43761 229 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 GLRA3O75311 464 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 IGLV1-44P01699 117 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 ACHEP22303 614 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 SELENOPP49908 381 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 CEACAM7Q14002 265 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 PTGR1Q14914 329 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 MAPK14Q16539 360 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 ARHGAP11BQ3KRB8 267 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 ATP6AP1LQ52LC2 224 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 ELFN2Q5R3F8 820 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 REP15Q6BDI9 236 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 TMEM225Q6GV28 225 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 MYPOPQ86VE0 399 aaPredicted RBP10.06□□□□□ -0.8
CDK9-205ENST00000498339 NATD1Q8N6N6 113 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 TMEM99Q8N816 258 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 FAM71CQ8NEG0 241 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 PSMA8Q8TAA3 256 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 ACMSDQ8TDX5 336 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 BCL2L2Q92843 193 aaPredicted RBP10.06□□□□□ -0.8
CDK9-205ENST00000498339 ZNF317Q96PQ6 595 aaPredicted RBP10.06□□□□□ -0.8
CDK9-205ENST00000498339 PRPF18Q99633 342 aaKnown RBP10.06□□□□□ -0.8
CDK9-205ENST00000498339 C1orf50Q9BV19 199 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 SF3B5Q9BWJ5 86 aaKnown RBP10.06□□□□□ -0.8
CDK9-205ENST00000498339 TAPBPLQ9BX59 468 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 OR51I1Q9H343 314 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 OXSMQ9NWU1 459 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 ADPRHL2Q9NX46 363 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 CRNNQ9UBG3 495 aaPredicted RBP10.06□□□□□ -0.8
CDK9-205ENST00000498339 REV1Q9UBZ9 1251 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 GIMAP2Q9UG22 337 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 TBK1Q9UHD2 729 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 DCDC2Q9UHG0 476 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 EMCNQ9ULC0 261 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 CORINQ9Y5Q5 1042 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 WNK2Q9Y3S1 2297 aa10.06□□□□□ -0.8
CDK9-205ENST00000498339 A0A0G2JMP0 313 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 A0A0X1KG70 313 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 TMEM129A0AVI4 362 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ZC3H12DA2A288 527 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 CLDN24A6NM45 220 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 AP3D1O14617 1153 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 WNT9BO14905 357 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ZNF208O43345 1280 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 PEX11AO75192 247 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 URI1O94763 535 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 IGKV3-15P01624 115 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ANPEPP15144 967 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ADRA2CP18825 462 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 GCAP28676 217 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 TACR3P29371 465 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 SH3BGRP55822 239 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 DNAJB13P59910 316 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 UBA52P62987 128 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 HBA1P69905 142 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 MYBPC1Q00872 1141 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ROR2Q01974 943 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 CKAP4Q07065 602 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 PDCD2Q16342 344 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 PGS1Q32NB8 556 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 SLC9B1Q4ZJI4 515 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 GPAT3Q53EU6 434 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 TYW3Q6IPR3 259 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 TNFAIP8L2Q6P589 184 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 C6orf120Q7Z4R8 191 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 C1QL2Q7Z5L3 287 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 LRRC17Q8N6Y2 441 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ZIC4Q8N9L1 334 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 OR4M2Q8NGB6 313 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 MAGEE2Q8TD90 523 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 TWIST2Q8WVJ9 160 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 C22orf15Q8WYQ4 148 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 RDH5Q92781 318 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 BOD1Q96IK1 185 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 PPP3R2Q96LZ3 170 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 SYT3Q9BQG1 590 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms