RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TMEM229AB2RXF0 380 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 C3orf80F5H4A9 247 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 H7C1Q1 480 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 ABCD4O14678 606 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 ITGA5P08648 1049 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 DANCRP0C864 163 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 PRKAR1BP31321 381 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 FOXG1P55316 489 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 ATP5J2P56134 94 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 HOXC5Q00444 222 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 CDK6Q00534 326 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 GABRA6Q16445 453 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 TSPO2Q5TGU0 170 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 C9orf135Q5VTT2 229 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 C1orf140Q5VVS0 124 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 TMEM225Q6GV28 225 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 REEP3Q6NUK4 255 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 TMEM108Q6UXF1 575 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 CLEC9AQ6UXN8 241 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 AAED1Q7RTV5 226 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 GPAT4Q86UL3 456 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 KRT73Q86Y46 540 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 CIARTQ8N365 385 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 OR9K2Q8NGE7 335 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 SMAP2Q8WU79 429 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 STON2Q8WXE9 905 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 NEUROG1Q92886 237 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC35B4Q969S0 331 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 TMEM45BQ96B21 275 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 THOC1Q96FV9 657 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 TRMT61AQ96FX7 289 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 POM121Q96HA1 1249 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 COX4I2Q96KJ9 171 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 MAGEB18Q96M61 343 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 MUS81Q96NY9 551 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 SPATA5L1Q9BVQ7 753 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 SF3B5Q9BWJ5 86 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 TRIM2Q9C040 744 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 RABEP2Q9H5N1 569 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 PIF1Q9H611 641 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC7A10Q9NS82 523 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 ADPRHL2Q9NX46 363 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 NPAP1Q9NZP6 1156 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 RPS6KB2Q9UBS0 482 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 DCTN4Q9UJW0 460 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC25A15Q9Y619 301 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 GMEB1Q9Y692 573 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 C2CD3Q4AC94 2353 aa7.46□□□□□ -1.22
HMGXB4-207ENST00000498212 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 TRBV5-3A0A0A0MS03 114 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 TRIM64A6NGJ6 449 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 TRIM64BA6NI03 449 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 EVPLLA8MZ36 301 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 SHISA9B4DS77 424 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 OVOL3O00110 214 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 PDLIM1O00151 329 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 SMAD7O15105 426 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 NPIPB7O75200 414 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 VAMP5O95183 116 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 AHSA1O95433 338 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 HEXAP06865 529 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 SOD3P08294 240 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 H2AFXP16104 143 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 GPX2P18283 190 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC6A2P23975 617 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 PTAFRP25105 342 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 GTF2E2P29084 291 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 MPGP29372 298 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 RPS5P46782 204 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ZNF83P51522 516 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 P2RY4P51582 365 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 CDH11P55287 796 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 TGFBR3Q03167 851 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 LTBQ06643 244 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 SCARB2Q14108 478 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 PGGHGQ32M88 737 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 DHRS4L2Q6PKH6 230 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 KLHL17Q6TDP4 642 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 Q71RC1 249 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ABHD12BQ7Z5M8 362 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 C10orf111Q8N326 155 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 C17orf78Q8N4C9 275 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ZIC4Q8N9L1 334 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 POMGNT2Q8NAT1 580 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 C1orf162Q8NEQ5 155 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 MFSD8Q8NHS3 518 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 GTPBP3Q969Y2 492 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 RADILQ96JH8 1075 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ZNF385AQ96PM9 386 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ZNF607Q96SK3 696 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 AMBRA1Q9C0C7 1298 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 SLCO5A1Q9H2Y9 848 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 ALG2Q9H553 416 aa7.45□□□□□ -1.22
HMGXB4-207ENST00000498212 TMEM38AQ9H6F2 299 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms