RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 A4GNTQ9UNA3 340 aa14.28□□□□□ -0.12
SSBP1-214ENST00000498107 CORINQ9Y5Q5 1042 aa14.28□□□□□ -0.12
SSBP1-214ENST00000498107 SPTAN1Q13813 2472 aaKnown RBP14.27□□□□□ -0.12
SSBP1-214ENST00000498107 IGKV1D-42A0A075B6H8 117 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 GPR171O14626 319 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 YES1P07947 543 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 ATP6V1B2P21281 511 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 H3F3AP84243 136 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 MS4A2Q01362 244 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 FOXF2Q12947 444 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 TRAM2Q15035 370 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 ABLIM2Q6H8Q1 611 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 OR6K3Q8NGY3 331 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 ABHD3Q8WU67 409 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 SLC25A36Q96CQ1 311 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 KTI12Q96EK9 354 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-214ENST00000498107 ZNF300Q96RE9 604 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-214ENST00000498107 ZNF426Q9BUY5 554 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 PTDSS2Q9BVG9 487 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 SF3B5Q9BWJ5 86 aaKnown RBP14.27□□□□□ -0.13
SSBP1-214ENST00000498107 CADM1Q9BY67 442 aaKnown RBP14.27□□□□□ -0.13
SSBP1-214ENST00000498107 LRMDAQ9H2I8 198 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 MAGIXQ9H6Y5 334 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 BCO1Q9HAY6 547 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 C6orf203Q9P0P8 240 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-214ENST00000498107 KLHL13Q9P2N7 655 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 V9GYQ6 96 aa14.27□□□□□ -0.13
SSBP1-214ENST00000498107 DOPEY2Q9Y3R5 2298 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 IGHV3-15A0A0B4J1V0 119 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 AQP7P3A6NL99 342 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 AQP12BA6NM10 295 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 FAM90A27PA6NNH2 459 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 ZNF724A8MTY0 619 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 FTCDNL1E5RQL4 147 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 TNFSF13O75888 250 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 LYPD3O95274 346 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 MT-ATP6P00846 226 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 IGF2P01344 180 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 THY1P04216 161 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 FABP3P05413 133 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 RNF224P0DH78 156 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 KIR2DL2P43627 348 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 YAP1P46937 504 aaKnown RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 ASCL1P50553 236 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 SMIM11AP58511 58 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 FAM98BQ52LJ0 330 aaKnown RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 OTUD3Q5T2D3 398 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 TMEM225Q6GV28 225 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 TSPYL5Q86VY4 417 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 AQP12AQ8IXF9 295 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 C10orf53Q8N6V4 93 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 TMEM239Q8WW34 195 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 TAAR8Q969N4 342 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 DNAJA3Q96EY1 480 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 C7orf34Q96L11 122 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 ZNF347Q96SE7 839 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 PSD2Q9BQI7 771 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 PRSS27Q9BQR3 290 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 ASPNQ9BXN1 380 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 CHST11Q9NPF2 352 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 IL1RAPQ9NPH3 570 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 FANCFQ9NPI8 374 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 NDUFAF4Q9P032 175 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 FOXD3Q9UJU5 478 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-214ENST00000498107 PROCRQ9UNN8 238 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 RASD1Q9Y272 281 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 B3GALT5Q9Y2C3 310 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 MED31Q9Y3C7 131 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 CACNA1CQ13936 2221 aa14.26□□□□□ -0.13
SSBP1-214ENST00000498107 USP9YO00507 2555 aaPredicted RBP14.25□□□□□ -0.13
SSBP1-214ENST00000498107 IGKV3D-15A0A087WSY6 115 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 ACOT8O14734 319 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 MSTNO14793 375 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 FZD7O75084 574 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 AKR7A3O95154 331 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 MT-ND1P03886 318 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 SEMG1P04279 462 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 H1F0P07305 194 aaKnown RBP14.25□□□□□ -0.13
SSBP1-214ENST00000498107 CD8BP10966 210 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 UMPSP11172 480 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 AGTR1P30556 359 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 SLC16A1P53985 500 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 SIRPAP78324 504 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 CHRNB3Q05901 458 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 FLOT2Q14254 428 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 WDR88Q6ZMY6 472 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 RRM2BQ7LG56 351 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 MAMDC2Q7Z304 686 aaPredicted RBP14.25□□□□□ -0.13
SSBP1-214ENST00000498107 GALNT5Q7Z7M9 940 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 STK32CQ86UX6 486 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 LIX1LQ8IVB5 337 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 P3H2Q8IVL5 708 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 NKAIN4Q8IVV8 208 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 TUSC5Q8IXB3 177 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 RNF113BQ8IZP6 322 aaKnown RBP14.25□□□□□ -0.13
SSBP1-214ENST00000498107 FAM86B1Q8N7N1 296 aa14.25□□□□□ -0.13
SSBP1-214ENST00000498107 SCAIQ8N9R8 606 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms