RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 UNC80Q8N2C7 3258 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A20PA6NIJ5 464 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 A6NIZ1 184 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A7PA6NKC0 464 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 P2RY10O00398 339 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 DYNC1I1O14576 645 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ENPP3O14638 875 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ITGB1BP1O14713 200 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ALOX15BO15296 676 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 RAD51BO15315 384 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HCRTR2O43614 444 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF207O43670 478 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 DUX1O43812 170 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CTAG2O75638 210 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 B3GALNT1O75752 331 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 RNASEH2AO75792 299 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 ARIH2O95376 493 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PLEKHA8P1O95397 391 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 DIRAS3O95661 229 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ALDOCP09972 364 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 HLA-GP17693 338 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 S1PR1P21453 382 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MATN1P21941 496 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PON1P27169 355 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TM4SF1P30408 202 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CCKARP32238 428 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CRKP46108 304 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC11A1P49279 550 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 RARRES1P49788 294 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 METAP1P53582 386 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TCTAP57738 103 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 B3GALT5-AS1P59052 145 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TNFAIP6P98066 277 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 SRSF2Q01130 221 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 RUNX1Q01196 453 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SULT2A1Q06520 285 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 AIMP2Q13155 320 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 DUSP8Q13202 625 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NAB1Q13506 487 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PSMD6Q15008 389 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MAPRE1Q15691 268 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 C15orf32Q32M92 178 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF658BQ4V348 819 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM74A1Q5RGS3 127 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC35F1Q5T1Q4 408 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PRAMEF8Q5VWM4 474 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 C1QL3Q5VWW1 255 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PRAMEF7Q5VXH5 474 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLFN12LQ6IEE8 588 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF562Q6V9R5 426 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 ZNF841Q6ZN19 808 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 Q6ZS52 159 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 GLT6D1Q7Z4J2 308 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC22A18ASQ8N1D0 253 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FTMTQ8N4E7 242 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NPEPL1Q8NDH3 523 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MDS2Q8NDY4 140 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR8B12Q8NGG6 310 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR10Q1Q8NGQ4 319 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR13F1Q8NGS4 319 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 OR13C5Q8NGS8 318 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TMBIM1Q969X1 311 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 COA7Q96BR5 231 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HMCESQ96FZ2 354 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CENPNQ96H22 339 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 PANX3Q96QZ0 392 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MYADMQ96S97 322 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 NELL2Q99435 816 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 TBX5Q99593 518 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CHCHD5Q9BSY4 110 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HDHD5Q9BXW7 423 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 MRPL20Q9BYC9 149 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM107BQ9H098 131 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 SLC25A31Q9H0C2 315 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 CHST12Q9NRB3 414 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 FAM207AQ9NSI2 230 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 TRMT13Q9NUP7 481 aaKnown RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 DACT1Q9NYF0 836 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PLEK2Q9NYT0 353 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 GTSE1Q9NYZ3 720 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PDP1Q9P0J1 537 aaPredicted RBP1.28□□□□□ -2.2
XRN1-214ENST00000498077 FZD4Q9ULV1 537 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 PLLPQ9Y342 182 aa1.28□□□□□ -2.2
XRN1-214ENST00000498077 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 IGKV1-12A0A0C4DH73 117 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 A0A0D9SFI3 127 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 KIR2DL5BA0A0G2JN68 375 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 KIR2DL5BA0A0G2JPC4 375 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 CBY3A6NI87 242 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 ZAR1LA6NP61 321 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 B4E171 279 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 C1QTNF3-AMACRE9PGA6 284 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 K7EM74 188 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 ZNF701M0R085 212 aaPredicted RBP1.28□□□□□ -2.21
XRN1-214ENST00000498077 CACNB4O00305 520 aaPredicted RBP1.28□□□□□ -2.21
XRN1-214ENST00000498077 TSPAN4O14817 238 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 AKAP3O75969 853 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 S1PR2O95136 353 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 MPZL1O95297 269 aa1.28□□□□□ -2.21
XRN1-214ENST00000498077 LHBP01229 141 aa1.28□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms