RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TM4SF19Q96DZ7 209 aa1.86□□□□□ -2.11
SMC4-227ENST00000497984 SH3YL1Q96HL8 342 aaPredicted RBP1.86□□□□□ -2.11
SMC4-227ENST00000497984 ALG12Q9BV10 488 aa1.86□□□□□ -2.11
SMC4-227ENST00000497984 KRT23Q9C075 422 aa1.86□□□□□ -2.11
SMC4-227ENST00000497984 IFI27L2Q9H2X8 130 aa1.86□□□□□ -2.11
SMC4-227ENST00000497984 RANBP3Q9H6Z4 567 aaPredicted RBP1.86□□□□□ -2.11
SMC4-227ENST00000497984 SIGLEC8Q9NYZ4 499 aa1.86□□□□□ -2.11
SMC4-227ENST00000497984 GNPTGQ9UJJ9 305 aa1.86□□□□□ -2.11
SMC4-227ENST00000497984 SCN2AQ99250 2005 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 IGLV11-55A0A075B6I3 123 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 A0A1B0GUS0 222 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 C11orf94C9JXX5 98 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 SS18L1O75177 396 aaPredicted RBP1.85□□□□□ -2.11
SMC4-227ENST00000497984 LRATO95237 230 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 CALCBP10092 127 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 CYP2F1P24903 491 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 SLC26A3P40879 764 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 VDAC2P45880 294 aaPredicted RBP1.85□□□□□ -2.11
SMC4-227ENST00000497984 MESDQ14696 234 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 TATDN3Q17R31 274 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 LRRC10Q5BKY1 277 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 ZNF571Q7Z3V5 609 aaPredicted RBP1.85□□□□□ -2.11
SMC4-227ENST00000497984 KIAA1328Q86T90 577 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 PCP2Q8IVA1 136 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 CENPLQ8N0S6 344 aaPredicted RBP1.85□□□□□ -2.11
SMC4-227ENST00000497984 CLEC4FQ8N1N0 589 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 FANK1Q8TC84 345 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 DTX3LQ8TDB6 740 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 MCOLN3Q8TDD5 553 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 ASB9Q96DX5 294 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 ZNF578Q96N58 590 aaPredicted RBP1.85□□□□□ -2.11
SMC4-227ENST00000497984 TAAR1Q96RJ0 339 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 NPAS2Q99743 824 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 TMEM246Q9BRR3 403 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 DPH5Q9H2P9 285 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 SIAEQ9HAT2 523 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 GLRX2Q9NS18 164 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 MFHAS1Q9Y4C4 1052 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 KDRP35968 1356 aa1.85□□□□□ -2.11
SMC4-227ENST00000497984 COL5A1P20908 1838 aaPredicted RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 IQANK1A0A1B0GTG1 560 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 HIP1O00291 1037 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 SLC31A2O15432 143 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 UGT1A9O60656 530 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 N4BP1O75113 896 aaKnown RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 TRIM16O95361 564 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 STAMBPO95630 424 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 MBD3O95983 291 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 KLK3P07288 261 aaPredicted RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 CISD3P0C7P0 127 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 TSPY4P0CV99 314 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 TSPY10P0CW01 314 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 MAPK3P27361 379 aaPredicted RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 FMO3P31513 532 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 MAP3K8P41279 467 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 RPS14P62263 151 aaKnown RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 MICBQ29980 383 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 SLC25A52Q3SY17 297 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 LINC00483Q53H64 154 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 SAMD4BQ5PRF9 694 aaKnown RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 CNSTQ6PJW8 725 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 ACOT1Q86TX2 421 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 PAQR7Q86WK9 346 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 ZNF695Q8IW36 515 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 LRRC43Q8N309 656 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 RNF182Q8N6D2 247 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 ATP6V0D2Q8N8Y2 350 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 FADS6Q8N9I5 356 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 CATSPER1Q8NEC5 780 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 STXBP6Q8NFX7 210 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 OR10G2Q8NGC3 310 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 ACER1Q8TDN7 264 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 RIT2Q99578 217 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 RIOK1Q9BRS2 568 aaKnown RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 TMEM117Q9H0C3 514 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 CDC42EP4Q9H3Q1 356 aaKnown RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 SRMSQ9H3Y6 488 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 WFDC1Q9HC57 220 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 IL26Q9NPH9 171 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 QPCTLQ9NXS2 382 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 OPN4Q9UHM6 478 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 COPS3Q9UNS2 423 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 TRAF3IP3Q9Y228 551 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 RPL36Q9Y3U8 105 aaKnown RBP1.84□□□□□ -2.11
SMC4-227ENST00000497984 SLC25A15Q9Y619 301 aa1.84□□□□□ -2.11
SMC4-227ENST00000497984 SF3B1O75533 1304 aaKnown RBP eCLIP1.84□□□□□ -2.127e-33■■■■■ 320.9
SMC4-227ENST00000497984 IDSB3KWA1 339 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 LOC110117498-PIK3R3F6TDL0 507 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 PEX7O00628 323 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 MAPK13O15264 365 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 MBTPS2O43462 519 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 OR1F1O43749 312 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 IGLV3-19P01714 112 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 MRPL3P09001 348 aaKnown RBP1.83□□□□□ -2.12
SMC4-227ENST00000497984 HPGDP15428 266 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 POLR2EP19388 210 aaKnown RBP1.83□□□□□ -2.12
SMC4-227ENST00000497984 NPR2P20594 1047 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 HNF1AP20823 631 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 CXCL5P42830 114 aa1.83□□□□□ -2.12
SMC4-227ENST00000497984 EFNB2P52799 333 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms