RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 WNT9BO14905 357 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 SEC22BO75396 215 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 CYP7B1O75881 506 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 CECR9P0C854 216 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 UROSP10746 265 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 THBS4P35443 961 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 SERPINB5P36952 375 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 GNGT1P63211 74 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 IL1RL1Q01638 556 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 UGT3A2Q3SY77 523 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 TBRG1Q3YBR2 411 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 FAHD2BQ6P2I3 314 aaPredicted RBP14.23□□□□□ -0.13
VIM-208ENST00000497849 NUP37Q8NFH4 326 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 ADAMTS15Q8TE58 950 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 TMEM234Q8WY98 164 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 FAHD2AQ96GK7 314 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 TSSK3Q96PN8 268 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 ACTRT3Q9BYD9 372 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 TUBB1Q9H4B7 451 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 NARFLQ9H6Q4 476 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 ZNF442Q9H7R0 627 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 GPATCH2Q9NW75 528 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 CHRNA9Q9UGM1 479 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 HDGFL3Q9Y3E1 203 aa14.23□□□□□ -0.13
VIM-208ENST00000497849 WNK2Q9Y3S1 2297 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 SNNO75324 88 aaPredicted RBP14.22□□□□□ -0.13
VIM-208ENST00000497849 FGF4P08620 206 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 LINC00032P0C843 101 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 ARAFP10398 606 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 SDC1P18827 310 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 NPR2P20594 1047 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 PRPH2P23942 346 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 APOBEC1P41238 236 aaKnown RBP14.22□□□□□ -0.13
VIM-208ENST00000497849 SLC17A1Q14916 467 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 KANK2Q63ZY3 851 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 ATG16L1Q676U5 607 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 SPATA21Q7Z572 469 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 CDK20Q8IZL9 346 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 OR4F15Q8NGB8 312 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 CLHC1Q8NHS4 586 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 LRRC8CQ8TDW0 803 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 METTL2AQ96IZ6 378 aaKnown RBP14.22□□□□□ -0.13
VIM-208ENST00000497849 FCRL1Q96LA6 429 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 PPP1R36Q96LQ0 422 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 SLC6A7Q99884 636 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 SLCO1B3Q9NPD5 702 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 BAIAP2L1Q9UHR4 511 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 RAP2CQ9Y3L5 183 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 DNAJC15Q9Y5T4 150 aa14.22□□□□□ -0.13
VIM-208ENST00000497849 SPIN1Q9Y657 262 aaPredicted RBP14.22□□□□□ -0.13
VIM-208ENST00000497849 NR5A2O00482 541 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 SKAP2O75563 359 aaPredicted RBP14.21□□□□□ -0.13
VIM-208ENST00000497849 PNPP00491 289 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 IGLV1-44P01699 117 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 ADRA2AP08913 450 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 UBTFL6P0CB48 400 aaPredicted RBP14.21□□□□□ -0.13
VIM-208ENST00000497849 HKR1P10072 659 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 GAAP10253 952 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 KITP10721 976 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 OR2B6P58173 313 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 UBA52P62987 128 aaKnown RBP14.21□□□□□ -0.13
VIM-208ENST00000497849 TUBA1BP68363 451 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TUBA4AP68366 448 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 FOXL1Q12952 345 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 ELFN2Q5R3F8 820 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TUBA1AQ71U36 451 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 MYPOPQ86VE0 399 aaPredicted RBP14.21□□□□□ -0.13
VIM-208ENST00000497849 ADGRG3Q86Y34 549 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 ZIC4Q8N9L1 334 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 OR1K1Q8NGR3 316 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 OR51F2Q8NH61 342 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TMEM45BQ96B21 275 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 MAGEB18Q96M61 343 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 SDF2Q99470 211 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 CCT7Q99832 543 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 SUCNR1Q9BXA5 334 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 NMUR2Q9GZQ4 415 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TPK1Q9H3S4 243 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 DYNLRB1Q9NP97 96 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 G6PC2Q9NQR9 355 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 THAP1Q9NVV9 213 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TREM2Q9NZC2 230 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 ARMCX1Q9P291 453 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TMEM181Q9P2C4 612 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 MARCOQ9UEW3 520 aaPredicted RBP14.21□□□□□ -0.13
VIM-208ENST00000497849 GIMAP2Q9UG22 337 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 TRAPPC4Q9Y296 219 aa14.21□□□□□ -0.13
VIM-208ENST00000497849 PIP5K1BO14986 540 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 SHOX2O60902 331 aaPredicted RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 BCAS1O75363 584 aaPredicted RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 CSTAP01040 98 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 TFP02787 698 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 IMPDH2P12268 514 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 LSP1P33241 339 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 GPR6P46095 362 aaPredicted RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 CLK1P49759 484 aaKnown RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 RPL14P50914 215 aaKnown RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 TP53BP2Q13625 1128 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 ZNF141Q15928 474 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 C3orf36Q3SXR2 165 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms