RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FAHD2AQ96GK7 314 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 JSRP1Q96MG2 331 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 CSPG4P5Q96PW8 444 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 KCNA7Q96RP8 456 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 CLCC1Q96S66 551 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 NSRP1Q9H0G5 558 aaKnown RBP5.2□□□□□ -1.58
BRCA1-224ENST00000497488 NEUROG2Q9H2A3 272 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 GLIPR2Q9H4G4 154 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 PDE10AQ9Y233 779 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 POFUT2Q9Y2G5 429 aa5.2□□□□□ -1.58
BRCA1-224ENST00000497488 CASZ1Q86V15 1759 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 TRBV9A0A0B4J1U6 114 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 PRSS37A4D1T9 235 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 TMCO5BA8MYB1 307 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 M0R3G1 203 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 RAB29O14966 203 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 ZBTB5O15062 677 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 GPAA1O43292 621 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 PDE5AO76074 875 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 TSPAN13O95857 204 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 GPIP06744 558 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 DCNP07585 359 aaKnown RBP5.19□□□□□ -1.58
BRCA1-224ENST00000497488 IFNA8P32881 189 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 OPRD1P41143 372 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 SOX3P41225 446 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 CSNK1G2P78368 415 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 GSTO1P78417 241 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 PLOD1Q02809 727 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-224ENST00000497488 STX3Q13277 289 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 GRB7Q14451 532 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 CYTH1Q15438 398 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 UNC50Q53HI1 259 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 GPR107Q5VW38 600 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 SLC18B1Q6NT16 456 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 REEP3Q6NUK4 255 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF852Q6ZMS4 543 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 LRRC74BQ6ZQY2 392 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 LCNL1Q6ZST4 164 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 SLC7A5P1Q8MH63 180 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 ARHGAP18Q8N392 663 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 C17orf78Q8N4C9 275 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 KIR3DL3Q8N743 410 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 OR4D10Q8NGI6 311 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 OR4D6Q8NGJ1 314 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 ANKRD7Q92527 254 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 CXorf40BQ96DE9 158 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF641Q96N77 438 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-224ENST00000497488 BDH2Q9BUT1 245 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 RAB34Q9BZG1 259 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 SEMA4CQ9C0C4 833 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 ZCCHC4Q9H5U6 513 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 CUTCQ9NTM9 273 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 MS4A12Q9NXJ0 267 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 PPIL1Q9Y3C6 166 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 LY75O60449 1722 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 GRIN2DO15399 1336 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 LRP5O75197 1615 aa5.19□□□□□ -1.58
BRCA1-224ENST00000497488 PALLDQ8WX93 1383 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 NEDD8-MDP1E9PL57 170 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 SIRPB1O00241 398 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 FZD7O75084 574 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 DUSP11O75319 330 aaKnown RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 FCN3O75636 299 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 NOL4O94818 638 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 LCA5LO95447 670 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 SEC24AO95486 1093 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ALDOBP05062 364 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 HOXB7P09629 217 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 RGRP47804 291 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 RGS19P49795 217 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF85Q03923 595 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ART3Q13508 389 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 LAGE3Q14657 143 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 P2RY6Q15077 328 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 CD226Q15762 336 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 TIGITQ495A1 244 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 PAGE2BQ5JRK9 111 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF530Q6P9A1 599 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ZNF788Q6ZQV5 615 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 SMIM5Q71RC9 77 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ARCQ7LC44 396 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 PID1Q7Z2X4 250 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 FAM122BQ7Z309 247 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 MRPL10Q7Z7H8 261 aaKnown RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ERICH1Q86X53 443 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 OR2L13Q8N349 312 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 INO80EQ8NBZ0 244 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 CATSPER1Q8NEC5 780 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 OR4C3Q8NH37 302 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 OR6S1Q8NH40 331 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 PRSS3P2Q8NHM4 247 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 LNX1Q8TBB1 728 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 CA5BP1Q8WTZ4 195 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 SORCS1Q8WY21 1168 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 FAM131CQ96AQ9 280 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 CCDC124Q96CT7 223 aaKnown RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 TOX2Q96NM4 488 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 ALS2CR12Q96Q35 445 aa5.18□□□□□ -1.58
BRCA1-224ENST00000497488 XPO6Q96QU8 1125 aaKnown RBP5.18□□□□□ -1.58
BRCA1-224ENST00000497488 NKX3-1Q99801 234 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms