RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SF3B5Q9BWJ5 86 aaKnown RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CALHM2Q9HA72 323 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 NMNAT1Q9HAN9 279 aaPredicted RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CD300AQ9UGN4 299 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 BLOC1S6Q9UL45 172 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 KALRNO60229 2985 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 IRGMA1A4Y4 181 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF587BE7ETH6 402 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 TIPRLO75663 272 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PTHP01270 115 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 MT-ND1P03886 318 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 RPS5P46782 204 aaKnown RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 RCN1Q15293 331 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 BEND4Q6ZU67 534 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 MBOAT2Q6ZWT7 520 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 GDF7Q7Z4P5 450 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 OR2AJ1Q8NGZ0 328 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 IKZF5Q9H5V7 419 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SP140LQ9H930 580 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SLC6A13Q9NSD5 602 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 FBXL2Q9UKC9 423 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ICAM5Q9UMF0 924 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SLC5A6Q9Y289 635 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SPEF1Q9Y4P9 236 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 U3KQV3 271 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SVILO95425 2214 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 E9PLN8 166 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PMS2P2O95744 297 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 GRPRP30550 384 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 MAP3K8P41279 467 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SNRPNP63162 240 aaKnown RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PON3Q15166 354 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SNCBQ16143 134 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ARL9Q6T311 187 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PAQR6Q6TCH4 344 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 FADS6Q8N9I5 356 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SIMC1Q8NDZ2 872 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 OR5M1Q8NGP8 315 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ZPLD1Q8TCW7 415 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 GMPPAQ96IJ6 420 aaPredicted RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 VKORC1Q9BQB6 163 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 TRIM4Q9C037 500 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SERHL2Q9H4I8 314 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 RIBC2Q9H4K1 309 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 NEK6Q9HC98 313 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 KLHL21Q9UJP4 597 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 RRP15Q9Y3B9 282 aaKnown RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 A0A087WUJ7 227 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 TNFSF11O14788 317 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 OR7A10O76100 309 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 OPN1LWP04000 364 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 IGFBP5P24593 272 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 STARP49675 285 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 CTXN1P60606 82 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 HOXC5Q00444 222 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 HSF2Q03933 536 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PUDPQ08623 228 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 MAPK14Q16539 360 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 DUSP7Q16829 419 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 NDUFAF6Q330K2 333 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SLC25A35Q3KQZ1 300 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ALKBH2Q6NS38 261 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 TMEM53Q6P2H8 277 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ARSKQ6UWY0 536 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 OLIG3Q7RTU3 272 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PQLC1Q8N2U9 271 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 RFKQ969G6 155 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SLC7A6OSQ96CW6 309 aaPredicted RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 ARL5BQ96KC2 179 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 PAPOLBQ9NRJ5 636 aaKnown RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SCN3BQ9NY72 215 aa7.79□□□□□ -1.16
U2AF1-212ENST00000496462 SPTBN1Q01082 2364 aaKnown RBP7.79□□□□□ -1.16
U2AF1-212ENST00000496462 A0A1W2PRQ8 180 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CENPBD1B2RD01 187 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 NPIPB9F8W1W9 429 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 MGRN1O60291 552 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 RPS4Y1P22090 263 aaKnown RBP7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CBLP22681 906 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CRABP1P29762 137 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 DGCR6Q14129 220 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ZBED5Q49AG3 693 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 XKRXQ6PP77 449 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 KLHL17Q6TDP4 642 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 LYPD8Q6UX82 237 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 AQP11Q8NBQ7 271 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 OR4C15Q8NGM1 316 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 PYDC1Q8WXC3 89 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 C3orf49Q96BT1 292 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 S100A14Q9HCY8 104 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 RHCGQ9UBD6 479 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 FBXL3Q9UKT7 428 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 A0A0B4J2E0 115 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 A0A1B0GX12 115 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CLPSP04118 112 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 T-ENOLP0DO92 83 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CPN1P15169 458 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 DIO1P49895 249 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 EFNA3P52797 238 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 PCBD1P61457 104 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 LINC00303Q3SY05 128 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms