RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 DUSP22Q9NRW4 184 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 GPR52Q9Y2T5 361 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 POMT1Q9Y6A1 747 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 GNG14A0A1W2PPG7 69 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PMS2P2O95744 297 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 IFNA2P01563 188 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 CD2P06729 351 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 FURINP09958 794 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 GLP1RP43220 463 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 PRR5P85299 388 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 NAE1Q13564 534 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 CSRP2Q16527 193 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 NDUFAF6Q330K2 333 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 DCAF12L2Q5VW00 463 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 SLC8B1Q6J4K2 584 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 C11orf87Q6NUJ2 197 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 SLC29A4Q7RTT9 530 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 SCN4BQ8IWT1 228 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 MUC20Q8N307 709 aaPredicted RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 LNX2Q8N448 690 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 SLC38A5Q8WUX1 472 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 IGSF8Q969P0 613 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 S100A16Q96FQ6 103 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 RIOK2Q9BVS4 552 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 ZCCHC2Q9C0B9 1178 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 ISG20L2Q9H9L3 353 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 HCFC1R1Q9NWW0 138 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 COMMD9Q9P000 198 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 MRPL15Q9P015 296 aaKnown RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 CLEC1BQ9P126 229 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 SLC22A14Q9Y267 594 aa8.37□□□□□ -1.07
HPS4-217ENST00000496385 TMEM184BQ9Y519 407 aaPredicted RBP8.37□□□□□ -1.07
HPS4-217ENST00000496385 CHD5Q8TDI0 1954 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 TNFRSF10BO14763 440 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 C8AP07357 584 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 HIST1H1BP16401 226 aaKnown RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 ACRV1P26436 265 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 PDHA2P29803 388 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 ANXA11P50995 505 aaKnown RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 NTHL1P78549 312 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 DMKNQ6E0U4 476 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 ARL9Q6T311 187 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 BEST3Q8N1M1 668 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 CHST14Q8NCH0 376 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 OR10H5Q8NGA6 315 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 OR4K1Q8NGD4 311 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 OR4D9Q8NGE8 314 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 SCAMP5Q8TAC9 235 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 ZNF461Q8TAF7 563 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 NEURL3Q96EH8 262 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 SAT2Q96F10 170 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 C14orf79Q96F83 325 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 FCRL4Q96PJ5 515 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 MAP3K3Q99759 626 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 VRK1Q99986 396 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 OR51I1Q9H343 314 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 EGLN3Q9H6Z9 239 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 MYNNQ9NPC7 610 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 KRCC1Q9NPI7 259 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.36□□□□□ -1.07
HPS4-217ENST00000496385 MAN2C1Q9NTJ4 1040 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 CKAP5Q14008 2032 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 DAPL1A0PJW8 107 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 KLHL18O94889 574 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 HOXB5P09067 269 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 UCHL1P09936 223 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 GNSP15586 552 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 HOXA5P20719 270 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 VAMP1P23763 118 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 HOXD9P28356 352 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 CASP9P55211 416 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 PKIAP61925 76 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 FOXO1Q12778 655 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 PIN1Q13526 163 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 DOC2AQ14183 400 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 ZXDCQ2QGD7 858 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 FAM199XQ6PEV8 388 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 ZCCHC12Q6PEW1 402 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 TMPRSS11BQ86T26 416 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 DMRTC2Q8IXT2 367 aaPredicted RBP8.36□□□□□ -1.07
HPS4-217ENST00000496385 KLHDC8AQ8IYD2 350 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 APCDD1Q8J025 514 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 TTC16Q8NEE8 873 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 SLC30A7Q8NEW0 376 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 OR52B4Q8NGK2 314 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 OR6T1Q8NGN1 323 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 ASB11Q8WXH4 323 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 SLAMF9Q96A28 289 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 TMEM19Q96HH6 336 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 PGLYRP3Q96LB9 341 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 TIMP4Q99727 224 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 GPA33Q99795 319 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 WDR13Q9H1Z4 485 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 TMEM27Q9HBJ8 222 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 PARPBPQ9NWS1 579 aa8.36□□□□□ -1.07
HPS4-217ENST00000496385 UPB1Q9UBR1 384 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms