RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ARID1BQ8NFD5 2236 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 WDR87Q6ZQQ6 2873 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NDUFB2O95178 105 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 MPC2O95563 127 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SERPINA3P01011 423 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 RAF1P04049 648 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 HOXB2P14652 356 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SRMP19623 302 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 S1PR1P21453 382 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF81P51508 661 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 RPS15P62841 145 aaKnown RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ERVK-25P63136 954 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 PITPNAQ00169 270 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 POU4F2Q12837 409 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ERV3-1Q14264 604 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 POU4F3Q15319 338 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 FAM199XQ6PEV8 388 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 RPLP0P6Q8NHW5 317 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 BAHD1Q8TBE0 780 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 SMIM4Q8WVI0 70 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 FAM131CQ96AQ9 280 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 C20orf85Q9H1P6 137 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 TSPAN10Q9H1Z9 355 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-217ENST00000495688 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 B3GNT2Q9NY97 397 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 BAIAP2Q9UQB8 552 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 CAMK2AQ9UQM7 478 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 ENTPD2Q9Y5L3 495 aa11.94□□□□□ -0.5
PTPN7-217ENST00000495688 CIB4A0PJX0 185 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 H3BSH0 61 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 CELA2BP08218 269 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-217ENST00000495688 PON3Q15166 354 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 ALG11Q2TAA5 492 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 HACD4Q5VWC8 232 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SIGIRRQ6IA17 410 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 ZCCHC12Q6PEW1 402 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 Q6ZTK2 550 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 BTN2A1Q7KYR7 527 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 LUZP2Q86TE4 346 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 NPEPL1Q8NDH3 523 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 OR11G2Q8NGC1 345 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 OR52I2Q8NH67 350 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 DLL4Q9NR61 685 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 MEIKINA0A087WXM9 373 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 G3V3Q6 166 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 LINC01565O15544 149 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SCO1O75880 301 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 TPOP07202 933 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SULT1A3P0DMM9 295 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SULT1A4P0DMN0 295 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 TYRP1P17643 537 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 VEGFCP49767 419 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 PGDP52209 483 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 KIAA1024LP59773 190 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 ACTA2P62736 377 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 ACTG2P63267 376 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 LINC00114Q6XXX2 140 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 FCRLAQ7L513 359 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SYS1Q8N2H4 156 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 LSMEM1Q8N8F7 131 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 RCBTB1Q8NDN9 531 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 OR4C3Q8NH37 302 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 ANGPTL6Q8NI99 470 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SUN5Q8TC36 379 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 RGP1Q92546 391 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-217ENST00000495688 SIPA1Q96FS4 1042 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 MED30Q96HR3 178 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 TRIM2Q9C040 744 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 OR10A4Q9H209 315 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 METTL17Q9H7H0 456 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-217ENST00000495688 LRIT1Q9P2V4 623 aa11.93□□□□□ -0.5
PTPN7-217ENST00000495688 EIF3KQ9UBQ5 218 aaKnown RBP11.93□□□□□ -0.5
PTPN7-217ENST00000495688 RPP14O95059 124 aaKnown RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 ZFPL1O95159 310 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 KLF8O95600 359 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 AK1P00568 194 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 SPI1P17947 270 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 DNASE1P24855 282 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 RPL22L1Q6P5R6 122 aaKnown RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 ULK3Q6PHR2 472 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 NPSR1Q6W5P4 371 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 GATSQ8NAP1 163 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 OR2T35Q8NGX2 323 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 OR14A16Q8NHC5 309 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 GAS2L1Q99501 681 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 CHIAQ9BZP6 476 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 SPRTNQ9H040 489 aaPredicted RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 HCN3Q9P1Z3 774 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 RBM34P42696 430 aaKnown RBP11.92□□□□□ -0.5
PTPN7-217ENST00000495688 DIO1P49895 249 aa11.92□□□□□ -0.5
PTPN7-217ENST00000495688 UBE2NLQ5JXB2 153 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms