RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 OR7E24Q6IFN5 339 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 FAM219AQ8IW50 185 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 ZNF321PQ8N8H1 164 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 ZDHHC1Q8WTX9 485 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TSLPQ969D9 159 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 CNN2Q99439 309 aaKnown RBP12.38□□□□□ -0.43
GPC1-209ENST00000495100 TIMM29Q9BSF4 260 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TBL1XR1Q9BZK7 514 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 SEC61A2Q9H9S3 476 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 FLRT3Q9NZU0 649 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 K7EQS6 105 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 PIPP12273 146 aaPredicted RBP12.38□□□□□ -0.43
GPC1-209ENST00000495100 PRKCAP17252 672 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 CARD17Q5XLA6 110 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 LIN54Q6MZP7 749 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 GALNTL5Q7Z4T8 443 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 POMGNT2Q8NAT1 580 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 OR2A5Q96R48 311 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 PIGUQ9H490 435 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 ZC4H2Q9NQZ6 224 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 EVA1BQ9NVM1 165 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 GDE1Q9NZC3 331 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 TESQ9UGI8 421 aaKnown RBP12.38□□□□□ -0.43
GPC1-209ENST00000495100 SLC23A1Q9UHI7 598 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 SLC35A3Q9Y2D2 325 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 DENND4CQ5VZ89 1909 aa12.38□□□□□ -0.43
GPC1-209ENST00000495100 H2AFB2P0C5Z0 115 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 ANXA7P20073 488 aaKnown RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 CXCR1P25024 350 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 NSDHLQ15738 373 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 DECR1Q16698 335 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 OR52B4Q8NGK2 314 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 TRIM63Q969Q1 353 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 KLHDC7BQ96G42 594 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 IL20Q9NYY1 176 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 SCDO00767 359 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 KDM4BO94953 1096 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 IL12BP29460 328 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 CAPZA2P47755 286 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 PTH2RP49190 550 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 FBXO46Q6PJ61 603 aaPredicted RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 MED25Q71SY5 747 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 PAQR7Q86WK9 346 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 FOXRED2Q8IWF2 684 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 ZNF681Q96N22 645 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 OR11A1Q9GZK7 315 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 MGAT4CQ9UBM8 478 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 KLF15Q9UIH9 416 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 MAFFQ9ULX9 164 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 FREM3P0C091 2139 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 KDM4EB2RXH2 506 aaPredicted RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 ARPC5O15511 151 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 NDUFB2O95178 105 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 PRKAR1BP31321 381 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 ETV6P41212 452 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 CSNK1EP49674 416 aaKnown RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 C21orf58P58505 322 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 RRAS2P62070 204 aaPredicted RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 PLPP7Q8NBV4 271 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 APOBEC4Q8WW27 367 aaKnown RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 KCTD12Q96CX2 325 aaKnown RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 JSRP1Q96MG2 331 aaPredicted RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 GAS2L1Q99501 681 aaPredicted RBP12.37□□□□□ -0.43
GPC1-209ENST00000495100 OR51J1Q9H342 316 aa12.37□□□□□ -0.43
GPC1-209ENST00000495100 TRAV18A0A075B6X5 111 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 SERTM1A2A2V5 107 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 GDNFP39905 211 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 ELOAQ14241 798 aaKnown RBP12.36□□□□□ -0.43
GPC1-209ENST00000495100 NDUFA5Q16718 116 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 ZNF782Q6ZMW2 699 aaPredicted RBP12.36□□□□□ -0.43
GPC1-209ENST00000495100 LINC00346Q8IVM7 164 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 NPRL2Q8WTW4 380 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 ZNRF4Q8WWF5 429 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 SPACA5Q96QH8 159 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 TMEM43Q9BTV4 400 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 PDCD10Q9BUL8 212 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 ADAM29Q9UKF5 820 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 DSPPQ9NZW4 1301 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 PCP4L1A6NKN8 68 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 MNDAP41218 407 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 OR10AC1Q8NH08 325 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 SYNPRQ8TBG9 265 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 HCAR2Q8TDS4 363 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 RDH8Q9NYR8 311 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 TRANK1O15050 2925 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 RGS11O94810 467 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 TCRBP04435 133 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms