RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MFSD8Q8NHS3 518 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 ZC3HAV1LQ96H79 300 aaKnown RBP14.15□□□□□ -0.14
LIME1-209ENST00000494776 TPD52L3Q96J77 140 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 LURAP1Q96LR2 239 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 WFIKKN1Q96NZ8 548 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 POLDIP3Q9BY77 421 aaKnown RBP14.15□□□□□ -0.14
LIME1-209ENST00000494776 ZNF226Q9NYT6 803 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 SH3GLB1Q9Y371 365 aa14.15□□□□□ -0.14
LIME1-209ENST00000494776 TRAV36DV7A0A075B6V5 113 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 A0A087WUJ7 227 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 NME4O00746 187 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 OR2T1O43869 369 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 RAMP1O60894 148 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 NPIPB7O75200 414 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 MRPL33O75394 65 aaKnown RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 ADAP00813 363 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 OR3A2P47893 321 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 SLC16A1P53985 500 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 EGR4Q05215 589 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 DAZAP2Q15038 168 aaPredicted RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 CYBRD1Q53TN4 286 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 STAC2Q6ZMT1 411 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 CXorf67Q86X51 503 aaPredicted RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 CARM1Q86X55 608 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 RBM45Q8IUH3 476 aaKnown RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 P3H2Q8IVL5 708 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 LZICQ8WZA0 190 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 APH1AQ96BI3 265 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 KTI12Q96EK9 354 aaPredicted RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 EPYCQ99645 322 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 KCTD14Q9BQ13 255 aaPredicted RBP14.14□□□□□ -0.15
LIME1-209ENST00000494776 HDHD5Q9BXW7 423 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 ALG2Q9H553 416 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 PARPBPQ9NWS1 579 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 ADA2Q9NZK5 511 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 TAGLN3Q9UI15 199 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 PRSS50Q9UI38 385 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 GPR52Q9Y2T5 361 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 TESMINQ9Y4I5 508 aa14.14□□□□□ -0.15
LIME1-209ENST00000494776 AQP7P3A6NL99 342 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 CXCR6O00574 342 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 CTAG2O75638 210 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 FAM107AO95990 144 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 PPP3CBP16298 524 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 IL32P24001 234 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 CCKARP32238 428 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 GSK3BP49841 420 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 CRYBA2P53672 197 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 KRTAP10-9P60411 292 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 MXRA7P84157 204 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 IL1RL1Q01638 556 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 NPTX1Q15818 432 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 SWT1Q5T5J6 900 aaKnown RBP14.13□□□□□ -0.15
LIME1-209ENST00000494776 FAM69AQ5T7M9 428 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 C8orf82Q6P1X6 216 aaPredicted RBP14.13□□□□□ -0.15
LIME1-209ENST00000494776 CASP12Q6UXS9 341 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 DEF8Q6ZN54 512 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 C10orf53Q8N6V4 93 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 ANKS4BQ8N8V4 417 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 OR4D11Q8NGI4 311 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 ADAMTS16Q8TE57 1224 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 TAAR8Q969N4 342 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 SF3B5Q9BWJ5 86 aaKnown RBP14.13□□□□□ -0.15
LIME1-209ENST00000494776 ACTR6Q9GZN1 396 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 CLEC4MQ9H2X3 399 aaPredicted RBP14.13□□□□□ -0.15
LIME1-209ENST00000494776 SPAG4Q9NPE6 437 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 RASSF1Q9NS23 344 aa14.13□□□□□ -0.15
LIME1-209ENST00000494776 GMPR2Q9P2T1 348 aaKnown RBP14.13□□□□□ -0.15
LIME1-209ENST00000494776 TRAPPC13A5PLN9 417 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 CHP2O43745 196 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 GMNNO75496 209 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 VAMP5O95183 116 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 IGHV3-9P01782 118 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 TNFRSF1BP20333 461 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 PTNP21246 168 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 CBLP22681 906 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 OR1E2P47887 323 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 TAS2R41P59536 307 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 SLC17A1Q14916 467 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 P2RY6Q15077 328 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 ALKBH2Q6NS38 261 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 Q6ZT83 130 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 GABRG1Q8N1C3 465 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 CCDC197Q8NCU1 140 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 STEAP2Q8NFT2 490 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 OR9K2Q8NGE7 335 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 KISS1RQ969F8 398 aaPredicted RBP14.12□□□□□ -0.15
LIME1-209ENST00000494776 FAM162AQ96A26 154 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 PTDSS2Q9BVG9 487 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 ARL8BQ9NVJ2 186 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 UPB1Q9UBR1 384 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 ADAM21Q9UKJ8 722 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 SLC7A7Q9UM01 511 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 RASD1Q9Y272 281 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 FLVCR1Q9Y5Y0 555 aa14.12□□□□□ -0.15
LIME1-209ENST00000494776 IGKV1D-42A0A075B6H8 117 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 FTCDNL1E5RQL4 147 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 SHOX2O60902 331 aaPredicted RBP14.11□□□□□ -0.15
LIME1-209ENST00000494776 GOSR1O95249 250 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms