RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ANKRD46Q86W74 232 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 ZNF440Q8IYI8 595 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 RFLNBQ8N5W9 214 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 MAGEE2Q8TD90 523 aaPredicted RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 VRK1Q99986 396 aaPredicted RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 SLC35A5Q9BS91 424 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 SLC38A1Q9H2H9 487 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 AKTIPQ9H8T0 292 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 CRNNQ9UBG3 495 aaPredicted RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 LGALS13Q9UHV8 139 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 ZC3H12DA2A288 527 aaKnown RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 ZNF587BE7ETH6 402 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 SPAG7O75391 227 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 KRT33AO76009 404 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 DBIP07108 87 aaKnown RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 IL7RP16871 459 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 RPS4Y1P22090 263 aaKnown RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 GIFP27352 417 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 CLNS1AP54105 237 aaKnown RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 EPS8Q12929 822 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 CEACAM7Q14002 265 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 ADIPOQQ15848 244 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 TBRG1Q3YBR2 411 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 TMEM225Q6GV28 225 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 UGT2A3Q6UWM9 527 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 TRIML2Q8N7C3 387 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 TMEM99Q8N816 258 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 OR4F15Q8NGB8 312 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 OR1K1Q8NGR3 316 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 WDR60Q8WVS4 1066 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 HPS1Q92902 700 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 C3orf49Q96BT1 292 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 AURKBQ96GD4 344 aaPredicted RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
PCCB-219ENST00000494742 RAB1BQ9H0U4 201 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 PLK3Q9H4B4 646 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 BTNL2Q9UIR0 455 aa12.73□□□□□ -0.37
PCCB-219ENST00000494742 VSTM5A8MXK1 200 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 KLF11O14901 512 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 AKR7A3O95154 331 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 ERCC1P07992 297 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 TACSTD2P09758 323 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 OR4A8P0C604 315 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 MYZAPP0CAP1 466 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 CDH2P19022 906 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 CXCR1P25024 350 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 SH3BGRP55822 239 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 NAAAQ02083 359 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 LRRC74AQ0VAA2 488 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 SYPL1Q16563 259 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 CARTPTQ16568 116 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 CR1LQ2VPA4 569 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 MRPL2Q5T653 305 aaKnown RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 ANKRD16Q6P6B7 361 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 SPATA19Q7Z5L4 167 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 GPAT4Q86UL3 456 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 ANKFN1Q8N957 763 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 NUP37Q8NFH4 326 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 NEU4Q8WWR8 484 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 BCL2L2Q92843 193 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 CCDC115Q96NT0 180 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 TAPBPLQ9BX59 468 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 ROPN1BQ9BZX4 212 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 BPESC1Q9GZL8 116 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 ZNF442Q9H7R0 627 aa12.72□□□□□ -0.37
PCCB-219ENST00000494742 ROPN1Q9HAT0 212 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.72□□□□□ -0.37
PCCB-219ENST00000494742 A8MVM7 634 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 E9PBE3 544 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 TCF21O43680 179 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 STAMBPO95630 424 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 IGLV1-44P01699 117 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 CHRM4P08173 479 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 S100A3P33764 101 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 ETV4P43268 484 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 CHN2P52757 468 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 OR7A5Q15622 319 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 PDCD2Q16342 344 aaPredicted RBP12.71□□□□□ -0.37
PCCB-219ENST00000494742 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 SPANXN4Q5MJ08 99 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 CREB3L2Q70SY1 520 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 NUDCD3Q8IVD9 361 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 ANKS4BQ8N8V4 417 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 LINC00470Q9BZP3 86 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 RASD1Q9Y272 281 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.37
PCCB-219ENST00000494742 A0A096LPI6 279 aa12.7□□□□□ -0.38
PCCB-219ENST00000494742 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
PCCB-219ENST00000494742 CCDC154A6NI56 674 aa12.7□□□□□ -0.38
PCCB-219ENST00000494742 TYROBPO43914 113 aa12.7□□□□□ -0.38
PCCB-219ENST00000494742 LGI1O95970 557 aa12.7□□□□□ -0.38
PCCB-219ENST00000494742 IGKV3-15P01624 115 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms