RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
BRCA1-223ENST00000494123 PIP5K1CO60331 668 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 TIPRLO75663 272 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 IFI30P13284 250 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 PLA2G2AP14555 144 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 CBLP22681 906 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 PER3P56645 1201 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 NUP107P57740 925 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 MBOAT2Q6ZWT7 520 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 FCRLAQ7L513 359 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 MCEMP1Q8IX19 187 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 CDK20Q8IZL9 346 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
BRCA1-223ENST00000494123 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 STMN2Q93045 179 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 SGTBQ96EQ0 304 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 DUS3LQ96G46 650 aaKnown RBP13.03□□□□□ -0.32
BRCA1-223ENST00000494123 UCN2Q96RP3 112 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 TTYH2Q9BSA4 534 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 ASPNQ9BXN1 380 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 MEPEQ9NQ76 525 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-223ENST00000494123 ARMC1Q9NVT9 282 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 SAMHD1Q9Y3Z3 626 aaKnown RBP13.03□□□□□ -0.32
BRCA1-223ENST00000494123 LYVE1Q9Y5Y7 322 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.32
BRCA1-223ENST00000494123 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.32
BRCA1-223ENST00000494123 ENTPD5O75356 428 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 DEAF1O75398 565 aaPredicted RBP13.02□□□□□ -0.32
BRCA1-223ENST00000494123 AKR7A3O95154 331 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 TGM6O95932 706 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 CH25HO95992 272 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.32
BRCA1-223ENST00000494123 MT-ATP6P00846 226 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 IL2RAP01589 272 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 FCGR1AP12314 374 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 PMPCAQ10713 525 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 ZNF74Q16587 644 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 EXOC3L2Q2M3D2 409 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 C4orf17Q53FE4 359 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 OTUD3Q5T2D3 398 aaPredicted RBP13.02□□□□□ -0.32
BRCA1-223ENST00000494123 GTF2IRD2BQ6EKJ0 949 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 OR2A2Q6IF42 318 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 ZFP1Q6P2D0 407 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 TBPL2Q6SJ96 375 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 PAQR6Q6TCH4 344 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 MAMDC2Q7Z304 686 aaPredicted RBP13.02□□□□□ -0.32
BRCA1-223ENST00000494123 GTF2IRD2Q86UP8 949 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 OR4K5Q8NGD3 323 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 PIGXQ8TBF5 258 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 BPIFA2Q96DR5 249 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 NANSQ9NR45 359 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 C20orf141Q9NUB4 165 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 DNAJB9Q9UBS3 223 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 U3KQV3 271 aa13.02□□□□□ -0.32
BRCA1-223ENST00000494123 PHF3Q92576 2039 aaKnown RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 HTR3EA5X5Y0 456 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 MBD3L4A6NDZ8 208 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 MBD3L3A6NE82 208 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 MBD3L5A6NJ08 208 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 LRRN3E7EW58 273 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 J3QKU1 62 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 CLOCKO15516 846 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 OR10H3O60404 316 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 E2F6O75461 281 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 AQP8O94778 261 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 IGF2P01344 180 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 BGLAPP02818 100 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 HIST1H2ABP04908 130 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 GLI4P10075 376 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 FASP25445 335 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 GRPRP30550 384 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 AGFG1P52594 562 aaKnown RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 PRKCDQ05655 676 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 PPP1R8Q12972 351 aaKnown RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 GK3PQ14409 553 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 MTFR2Q6P444 385 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 HIST3H2AQ7L7L0 130 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 TMEM99Q8N816 258 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 C9orf106Q8NAJ2 232 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 MBD3L2Q8NHZ7 208 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-223ENST00000494123 RNF128Q8TEB7 428 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 HIST1H2ACQ93077 130 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 MOGAT1Q96PD6 335 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 FKRPQ9H9S5 495 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 TMEM5Q9Y2B1 443 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.33
BRCA1-223ENST00000494123 M0R082 166 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 CCNB2O95067 398 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 LDLRP01130 860 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 SAGP10523 405 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-223ENST00000494123 KLK2P20151 261 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 TIMP3P35625 211 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 IFNGR2P38484 337 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 HMGA2P52926 109 aa13.01□□□□□ -0.33
BRCA1-223ENST00000494123 CTBP2P56545 445 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms