RNA–Protein interactions for RNA: ENST00000494080.5

CCDC88B-209, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 4,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-209ENST00000494080 DLSTP36957 453 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 MTNR1BP49286 362 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 POU4F2Q12837 409 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SERTAD2Q14140 314 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 TMEM205Q6UW68 189 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SLC51BQ86UW2 128 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SDR9C7Q8NEX9 313 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 NLGN4YQ8NFZ3 816 aaPredicted RBP15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SYNPRQ8TBG9 265 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 OR52A5Q9H2C5 316 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 NDUFB2O95178 105 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 MMP11P24347 488 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 PRSS3P35030 304 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 RAB2AP61019 212 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 TNFRSF17Q02223 184 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 TEKQ02763 1124 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 FAM69BQ5VUD6 431 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 OR6V1Q8N148 313 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SVBPQ8N300 66 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 CNTNAP3BQ96NU0 1288 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 LPAR4Q99677 370 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 WBP1LQ9NX94 342 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SRCAPQ6ZRS2 3230 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 PPM1DO15297 605 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 LIPCP11150 499 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 OCLNQ16625 522 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 LRFN4Q6PJG9 635 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 C12orf45Q8N5I9 185 aaPredicted RBP15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SFXN5Q8TD22 340 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 SGPP1Q9BX95 441 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 ZNF700Q9H0M5 742 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 PRMT8Q9NR22 394 aaPredicted RBP15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 ZNF443Q9Y2A4 671 aaPredicted RBP15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 LAMTOR5O43504 91 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 PPP2CBP62714 309 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 PPP2CAP67775 309 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 TSPAN31Q12999 210 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 CHAF1BQ13112 559 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 NKPD1Q17RQ9 610 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 KIAA0895LQ68EN5 471 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 ACSM5Q6NUN0 579 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 ORAI3Q9BRQ5 295 aa15.12■□□□□ 0.01
CCDC88B-209ENST00000494080 LGALS8O00214 317 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 SOCS6O14544 535 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 SSX5O60225 188 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 SLC37A2Q8TED4 501 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 LMF1Q96S06 567 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 TMEM129A0AVI4 362 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 CPEP16870 476 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 FRKP42685 505 aaPredicted RBP15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 SSX1Q16384 188 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 CDKN3Q16667 212 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 RNASE10Q5GAN6 216 aaKnown RBP15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 SLC48A1Q6P1K1 146 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 NLRP8Q86W28 1048 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 NAXEQ8NCW5 288 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 PAQR8Q8TEZ7 354 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 DUSP19Q8WTR2 217 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 GHSRQ92847 366 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 TMEM38AQ9H6F2 299 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 KIF13BQ9NQT8 1826 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 AKR1C4P17516 323 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 LGALS14Q8TCE9 139 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 TBC1D20Q96BZ9 403 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 PFDN5Q99471 154 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 C20orf85Q9H1P6 137 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 RXFP3Q9NSD7 469 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 PPP4R1LQ9P1A2 415 aa15.11■□□□□ 0.01
CCDC88B-209ENST00000494080 KCNJ5P48544 419 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 OR1Q1Q15612 314 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 MAPK14Q16539 360 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 MEPCEQ7L2J0 689 aaKnown RBP15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 OR6M1Q8NGM8 313 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 ELSPBP1Q96BH3 223 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 LRRC46Q96FV0 321 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 MAP3K3Q99759 626 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 RPP25Q9BUL9 199 aaKnown RBP15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 KIR3DX1Q9H7L2 352 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 RAB3DO95716 219 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 APOC1P02654 83 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 SFTPBP07988 381 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 PTBP1P26599 531 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 CXCL12P48061 93 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 TMEM196Q5HYL7 178 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 GLT8D1Q68CQ7 371 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 TMEM184AQ6ZMB5 413 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 PRSS42Q7Z5A4 293 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 OR5T3Q8NGG3 340 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 ABHD4Q8TB40 342 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 SLC22A8Q8TCC7 542 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 ADAMTS18Q8TE60 1221 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 MS4A6EQ96DS6 147 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 C6orf106Q9H6K1 298 aaPredicted RBP15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 PLXNB2O15031 1838 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 A0A1W2PR48 441 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 JMJD7P0C870 316 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 ZNF250P15622 560 aa15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 EIF4EBP2Q13542 120 aaPredicted RBP15.1■□□□□ 0.01
CCDC88B-209ENST00000494080 OR5M10Q6IEU7 315 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms