RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-215	ENST00000494058	ACTR3	P61158	418 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	TMEM201	Q5SNT2	666 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	OR2T5	Q6IEZ7	315 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	XKRX	Q6PP77	449 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	MBOAT2	Q6ZWT7	520 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	H1FNT	Q75WM6	255 aa	Predicted RBP	11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PAPD5	Q8NDF8	572 aa	Known RBP	11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ADPRHL1	Q8NDY3	354 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	OR2T29	Q8NH02	315 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FNDC9	Q8TBE3	224 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	TAAR8	Q969N4	342 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SLC25A36	Q96CQ1	311 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	KTI12	Q96EK9	354 aa	Predicted RBP	11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SGTB	Q96EQ0	304 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	DUS3L	Q96G46	650 aa	Known RBP	11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ZNF845	Q96IR2	970 aa	Predicted RBP	11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ALPK1	Q96QP1	1244 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	DMRTA2	Q96SC8	542 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PRSS27	Q9BQR3	290 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SF3B5	Q9BWJ5	86 aa	Known RBP	11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SFXN3	Q9BWM7	321 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	COQ10B	Q9H8M1	238 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ARMC1	Q9NVT9	282 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PARPBP	Q9NWS1	579 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	RHCG	Q9UBD6	479 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	RASD1	Q9Y272	281 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	TESMIN	Q9Y4I5	508 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	AP4S1	Q9Y587	144 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FAM215A	Q9Y5M1	114 aa		11.77	□□□□□ -0.53
SKIV2L-215	ENST00000494058	HEATR5A	Q86XA9	2040 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ZC3H12D	A2A288	527 aa	Known RBP	11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	TNFRSF11B	O00300	401 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	DVL2	O14641	736 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FFAR1	O14842	300 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CYTIP	O60759	359 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SEMA7A	O75326	666 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	AGFG2	O95081	481 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PRSS23	O95084	383 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	THY1	P04216	161 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	IMPDH2	P12268	514 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CTSS	P25774	331 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CHRNB4	P30926	498 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CEACAM8	P31997	349 aa	Predicted RBP	11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SLC9A3	P48764	834 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	HMGA2	P52926	109 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	H3F3A	P84243	136 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	EGR4	Q05215	589 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	RASGEF1B	Q0VAM2	473 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	RTL6	Q6ICC9	239 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	C3P1	Q6ZMU1	363 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	NKAIN4	Q8IVV8	208 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	RNF128	Q8TEB7	428 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	TMEM255B	Q8WV15	326 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	STMN2	Q93045	179 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	BPIFA2	Q96DR5	249 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	DHRS1	Q96LJ7	313 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	BDH2	Q9BUT1	245 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	MRPL39	Q9NYK5	338 aa	Known RBP	11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	DNAJB9	Q9UBS3	223 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ZNF462	Q96JM2	2506 aa		11.76	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SHANK1	Q9Y566	2161 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	IGKV1D-42	A0A075B6H8	117 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	AQP7P3	A6NL99	342 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ENO4	A6NNW6	628 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ZNF724	A8MTY0	619 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	KPNA4	O00629	521 aa	Predicted RBP	11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	AKAP8	O43823	692 aa	Known RBP	11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FKBP6	O75344	327 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	E2F6	O75461	281 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	LYPD3	O95274	346 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CH25H	O95992	272 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	YES1	P07947	543 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SAG	P10523	405 aa	Predicted RBP	11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	IFI30	P13284	250 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FAS	P25445	335 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	IL1RL1	Q01638	556 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PRKCD	Q05655	676 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PMS2P3	Q13401	168 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	C1D	Q13901	141 aa	Known RBP	11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ZNF74	Q16587	644 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FAM214B	Q7L5A3	538 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	STK32C	Q86UX6	486 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	FAM26E	Q8N5C1	309 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	OR5J2	Q8NH18	312 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	OR52J3	Q8NH60	311 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SLC7A13	Q8TCU3	470 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CA5BP1	Q8WTZ4	195 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	LIPH	Q8WWY8	451 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	ROBO4	Q8WZ75	1007 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	UTP4	Q969X6	686 aa	Known RBP	11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CCDC120	Q96HB5	630 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PTDSS2	Q9BVG9	487 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SRXN1	Q9BYN0	137 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	PIGM	Q9H3S5	423 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	CHST11	Q9NPF2	352 aa		11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.75	□□□□□ -0.53
SKIV2L-215	ENST00000494058		A0A087WUU8	490 aa		11.74	□□□□□ -0.53
SKIV2L-215	ENST00000494058	LOC102725191	A0A1B0GVB3	256 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms