RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 CAMK2AQ9UQM7 478 aa17.41■□□□□ 0.38
USP39-218ENST00000493829 ZNF407Q9C0G0 2248 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 ATRXP46100 2492 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 LIPT2A6NK58 231 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 TTLL8A6PVC2 850 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 LINC01387J3KSC0 135 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 SULT2B1O00204 365 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 ACTL6AO96019 429 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 ZNF26P17031 533 aaPredicted RBP17.4■□□□□ 0.38
USP39-218ENST00000493829 GRPRP30550 384 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 GSSP48637 474 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 TSPAN31Q12999 210 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 KDM4DQ6B0I6 523 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 HBMQ6B0K9 141 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 VASNQ6EMK4 673 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 TMPRSS11FQ6ZWK6 438 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 FANK1Q8TC84 345 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 GPR137Q96N19 417 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 TIMP4Q99727 224 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 SRXN1Q9BYN0 137 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 POTEKPQ9BYX7 375 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 VCXQ9H320 206 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 RIBC2Q9H4K1 309 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 EGLN3Q9H6Z9 239 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 USE1Q9NZ43 259 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 IL20RAQ9UHF4 553 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 HDGFL3Q9Y3E1 203 aa17.4■□□□□ 0.38
USP39-218ENST00000493829 PRRC2CQ9Y520 2896 aaKnown RBP17.4■□□□□ 0.38
USP39-218ENST00000493829 IGHV3-15A0A0B4J1V0 119 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 FTCDNL1E5RQL4 147 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 NPIPA2E9PIF3 369 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 NPIPA3F8WFD2 350 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 M0R082 166 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 CXCL13O43927 109 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ZNF708P17019 499 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 AQP4P55087 323 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 CLDN15P56746 228 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 PLXDC2Q6UX71 529 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 IZUMO2Q6UXV1 221 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 NANOGNBQ7Z5D8 188 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 OAFQ86UD1 273 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 KIF18BQ86Y91 864 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 MEIOBQ8N635 442 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 OR10D3Q8NH80 312 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 OR2V1Q8NHB1 315 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ZNF417Q8TAU3 575 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ZNF845Q96IR2 970 aaPredicted RBP17.39■□□□□ 0.37
USP39-218ENST00000493829 ZNF587Q96SQ5 575 aaPredicted RBP17.39■□□□□ 0.37
USP39-218ENST00000493829 VCX3BQ9H321 246 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 POFUT2Q9Y2G5 429 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ORC6Q9Y5N6 252 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 AKR7A3O95154 331 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 HPRP00739 348 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 POU1F1P28069 291 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 VHLP40337 213 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 NUP107P57740 925 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 NHSL2Q5HYW2 709 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 TMPPEQ6ZT21 453 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ESPNLQ6ZVH7 1005 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 MAMDC2Q7Z304 686 aaPredicted RBP17.39■□□□□ 0.37
USP39-218ENST00000493829 OR5M9Q8NGP3 310 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 MFSD8Q8NHS3 518 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 FAR1Q8WVX9 515 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 MIB2Q96AX9 1013 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ASPNQ9BXN1 380 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 FKRPQ9H9S5 495 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ALKBH4Q9NXW9 302 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 ZNF229Q9UJW7 825 aa17.39■□□□□ 0.37
USP39-218ENST00000493829 BLOC1S5-TXNDC5H3BN57 136 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 H3BN98 237 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 AQP7O14520 342 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 OR2T1O43869 369 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 SNAP29O95721 258 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 MT-ATP6P00846 226 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 HIST1H2ABP04908 130 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 FKBP2P26885 142 aaKnown RBP17.38■□□□□ 0.37
USP39-218ENST00000493829 CLK1P49759 484 aaKnown RBP17.38■□□□□ 0.37
USP39-218ENST00000493829 SLC36A3Q495N2 470 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 ZNF324BQ6AW86 544 aaPredicted RBP17.38■□□□□ 0.37
USP39-218ENST00000493829 HIST3H2AQ7L7L0 130 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 IGFN1Q86VF2 1251 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 HIST1H2ACQ93077 130 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 ADGRG7Q96K78 797 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 TNFRSF13CQ96RJ3 184 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 PLA2G12AQ9BZM1 189 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 MCCC2Q9HCC0 563 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 PLSCR2Q9NRY7 297 aa17.38■□□□□ 0.37
USP39-218ENST00000493829 A0A1B0GVC2 190 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 SERPINI2O75830 405 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 PMS2P2O95744 297 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 ASAH2BP0C7U1 165 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 GSTM3P21266 225 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 TDGF1P3P51864 188 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 MLLT10P55197 1068 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 CARD18P57730 90 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 PMS2P3Q13401 168 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 SGCBQ16585 318 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 CLEC12AQ5QGZ9 265 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 ARHGAP11AQ6P4F7 1023 aa17.37■□□□□ 0.37
USP39-218ENST00000493829 ZNF620Q6ZNG0 422 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms