RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 TPD52L3Q96J77 140 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 TACO1Q9BSH4 297 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 POTEKPQ9BYX7 375 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 EVA1AQ9H8M9 152 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 PLSCR4Q9NRQ2 329 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 CMTM6Q9NX76 183 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ELOVL5Q9NYP7 299 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 ADA2Q9NZK5 511 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 EMC3Q9P0I2 261 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 GMPR2Q9P2T1 348 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 NDRG3Q9UGV2 375 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 PRDM4Q9UKN5 801 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 TRAPPC4Q9Y296 219 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC9A8Q9Y2E8 581 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 SH3GLB1Q9Y371 365 aa9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-222ENST00000493792 SH3D21A4FU49 640 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 C16orf97H3BN30 126 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 GPR171O14626 319 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 DNPH1O43598 174 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 EIF1BO60739 113 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 SHOX2O60902 331 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 FAM107AO95990 144 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 C8BP07358 591 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 PNMTP11086 282 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 TNFRSF1BP20333 461 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 CD247P20963 164 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 CBLP22681 906 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 KDELR2P33947 212 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 RPS5P46782 204 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 IL1RL1Q01638 556 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 VEZF1Q14119 521 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 GUSBP1Q15486 140 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 NRF1Q16656 503 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 TMEM225Q6GV28 225 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 ABLIM2Q6H8Q1 611 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 ALKBH2Q6NS38 261 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 DEF8Q6ZN54 512 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 BEND4Q6ZU67 534 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 CCDC80Q76M96 950 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 GPAT4Q86UL3 456 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 PRIMA1Q86XR5 153 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 UBE2J2Q8N2K1 259 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 TMEM99Q8N816 258 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 OR6T1Q8NGN1 323 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 STK35Q8TDR2 534 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 FAM222BQ8WU58 562 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 DNAJA4Q8WW22 397 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 NANOS1Q8WY41 292 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZC3HAV1LQ96H79 300 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 ARHGDIGQ99819 225 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 SMR3AQ99954 134 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 KCTD14Q9BQ13 255 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 PSD2Q9BQI7 771 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 WFDC6Q9BQY6 131 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 GPATCH1Q9BRR8 931 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 MED18Q9BUE0 208 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 ALG2Q9H553 416 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 GP6Q9HCN6 339 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 ARL8BQ9NVJ2 186 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 TAGLN3Q9UI15 199 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 BAG5Q9UL15 447 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 NOSIPQ9Y314 301 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
TRAPPC12-222ENST00000493792 LIPT2A6NK58 231 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF814B7Z6K7 855 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CXCR6O00574 342 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 NME4O00746 187 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 NDUFAB1O14561 156 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 RAMP1O60894 148 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 GMNNO75496 209 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CTAG2O75638 210 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 ZNF682O95780 498 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 IGHV3-9P01782 118 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 UGT2B10P36537 528 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 GSK3BP49841 420 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CDH12P55289 794 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CYBRD1Q53TN4 286 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 ENTPD8Q5MY95 495 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 FAM91A1Q658Y4 838 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 PAQR6Q6TCH4 344 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CASP12Q6UXS9 341 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 HACD2Q6Y1H2 254 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 GALNT5Q7Z7M9 940 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CARM1Q86X55 608 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 RBM45Q8IUH3 476 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 LSMEM1Q8N8F7 131 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 CCDC197Q8NCU1 140 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 LZICQ8WZA0 190 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 SLC38A4Q969I6 547 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 FAM162AQ96A26 154 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 KTI12Q96EK9 354 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 BCO1Q9HAY6 547 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 PRSS50Q9UI38 385 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 ST6GALNAC2Q9UJ37 374 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 ADAM21Q9UKJ8 722 aa9.24□□□□□ -0.93
TRAPPC12-222ENST00000493792 HRNRQ86YZ3 2850 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-222ENST00000493792 TRAV36DV7A0A075B6V5 113 aa9.23□□□□□ -0.93
TRAPPC12-222ENST00000493792 A0A0B4J2E0 115 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms