RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR2C1O95371 312 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SOD1P00441 154 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 F13BP05160 661 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RPA2P15927 270 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 GABRA5P31644 462 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CEBPGP53567 150 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ACTA2P62736 377 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ACTG2P63267 376 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ACTC1P68032 377 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ACTA1P68133 377 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SP3Q02447 781 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SLC10A7Q0GE19 358 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 MAP4K2Q12851 820 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RHEBQ15382 184 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SLC36A2Q495M3 483 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TIGD5Q53EQ6 642 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 MESTQ5EB52 335 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CRB2Q5IJ48 1285 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 DCAF10Q5QP82 559 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RTL6Q6ICC9 239 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TP53INP2Q8IXH6 220 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 HORMAD2Q8N7B1 307 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 FAM71CQ8NEG0 241 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 BBS10Q8TAM1 723 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 FAAP24Q9BTP7 215 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 LAMA2P24043 3122 aaKnown RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TBC1D3FA6NER0 549 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TP53I11O14683 189 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 PLRG1O43660 514 aaKnown RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CDC40O60508 579 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 REM1O75628 298 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 AQP2P41181 271 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ZFP36L2P47974 494 aaKnown RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 AGTR2P50052 363 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 HTR6P50406 440 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 IDH3GP51553 393 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 EFNA5P52803 228 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CXADRP78310 365 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ARF5P84085 180 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RFTN2Q52LD8 501 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM244Q5VVB8 128 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 KIAA1161Q6NSJ0 714 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 HPSE2Q8WWQ2 592 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TSSK3Q96PN8 268 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF649Q9BS31 505 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 FAIM2Q9BWQ8 316 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 NPDC1Q9NQX5 325 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 HEBP1Q9NRV9 189 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SUSD2Q9UGT4 822 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ST3GAL5Q9UNP4 418 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 OR2M5A3KFT3 312 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 ANKUB1A6NFN9 424 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 A6NJY4 79 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 HCRTR2O43614 444 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 CTNSO60931 367 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 GGCTO75223 188 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 DFFBO76075 338 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 SOX18P35713 384 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 HMGCS1Q01581 520 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 MRPL49Q13405 166 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 KCNMB1Q16558 191 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 PTPRNQ16849 979 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 IFI44LQ53G44 452 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF697Q5TEC3 545 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 DCAF12L2Q5VW00 463 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 BAP18Q8IXM2 172 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 C10orf111Q8N326 155 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 OR2AK2Q8NG84 335 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 OR11G2Q8NGC1 345 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 RCC1LQ96I51 464 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 JSRP1Q96MG2 331 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 PANX1Q96RD7 426 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 SEPT5Q99719 369 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 NUDT16L1Q9BRJ7 211 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF2Q9BSG1 426 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF430Q9H8G1 570 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 MMP26Q9NRE1 261 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 C1GALT1Q9NS00 363 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 SCML2Q9UQR0 700 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 EXOGQ9Y2C4 368 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 LSM2Q9Y333 95 aaKnown RBP6.34□□□□□ -1.39
VPS13B-205ENST00000493587 ADAM18Q9Y3Q7 739 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 KPTNQ9Y664 436 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 MYADML2A6NDP7 307 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 OR52A4PA6NMU1 304 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 MASP2O00187 686 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 DCTN6O00399 190 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 PIRO00625 290 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 BCL2L11O43521 198 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 SH3BGRLO75368 114 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 EFEMP2O95967 443 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 FGBP02675 491 aa6.34□□□□□ -1.39
VPS13B-205ENST00000493587 OPN1LWP04000 364 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms