RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, human

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-208	ENST00000493507	TRIM40	Q6P9F5	258 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	NPSR1	Q6W5P4	371 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	EXOC3L1	Q86VI1	746 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	C10orf107	Q8IVU9	208 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	PRR22	Q8IZ63	422 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	RNF113B	Q8IZP6	322 aa	Known RBP	4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	METTL4	Q8N3J2	472 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	MREG	Q8N565	214 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR2AK2	Q8NG84	335 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	TAAR8	Q969N4	342 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	TM4SF18	Q96CE8	201 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	CNRIP1	Q96F85	164 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	GRAMD2B	Q96HH9	432 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	EGLN2	Q96KS0	407 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	FCRL1	Q96LA6	429 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	CMTM3	Q96MX0	182 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	IP6K3	Q96PC2	410 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZIM3	Q96PE6	472 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	FAM111A	Q96PZ2	611 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	RASL10B	Q96S79	203 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	RTN4R	Q9BZR6	473 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	MAGIX	Q9H6Y5	334 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	ACTR8	Q9H981	624 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	KCNK13	Q9HB14	408 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	LYRM4	Q9HD34	91 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	ADAP2	Q9NPF8	381 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	MAT2B	Q9NZL9	334 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	FLRT3	Q9NZU0	649 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	MMACHC	Q9Y4U1	282 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	CSMD2	Q7Z408	3487 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	POLQ	O75417	2590 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	ANKRD17	O75179	2603 aa	Known RBP	4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	PKDREJ	Q9NTG1	2253 aa		4.37	□□□□□ -1.71
CCNB3-208	ENST00000493507	C2CD3	Q4AC94	2353 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CENPE	Q02224	2701 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507		A0A1B0GUV1	79 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	SYCE1L	A8MT33	242 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	C17orf105	B2RV13	164 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	WWP2	O00308	870 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	FOXE1	O00358	373 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CTNS	O60931	367 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	GLRA3	O75311	464 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR2J2	O76002	312 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	RSL1D1	O76021	490 aa	Known RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	SUPT7L	O94864	414 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	SEMA3D	O95025	777 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	KLK1	P06870	262 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	IL3	P08700	152 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	RBP1	P09455	135 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	FAM58BP	P0C7Q3	252 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	IMPDH1	P20839	514 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CPN2	P22792	545 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	HTR1E	P28566	365 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	DNASE1L1	P49184	302 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	NAGLU	P54802	743 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	HSD17B7	P56937	341 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	BRWD1-AS2	P59051	145 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ERVK-8	P63133	956 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	KRTAP1-1	Q07627	177 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ART3	Q13508	389 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CUL3	Q13618	768 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	EXOSC7	Q15024	291 aa	Known RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	KIAA0040	Q15053	153 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	NNAT	Q16517	81 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	C3AR1	Q16581	482 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF630	Q2M218	657 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	KLHL22	Q53GT1	634 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CMPK2	Q5EBM0	449 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	XKR7	Q5GH72	579 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	NDUFAF5	Q5TEU4	345 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	AGAP7P	Q5VUJ5	663 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	WBP2NL	Q6ICG8	309 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	PLXDC2	Q6UX71	529 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507		Q6ZSR9	355 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	GPRIN3	Q6ZVF9	776 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	TUBA1A	Q71U36	451 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	GALNTL5	Q7Z4T8	443 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF595	Q8IYB9	648 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF615	Q8N8J6	731 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	EIF1AD	Q8N9N8	165 aa	Known RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CLHC1	Q8NHS4	586 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	M1AP	Q8TC57	530 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ACMSD	Q8TDX5	336 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	NR4A3	Q92570	626 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	HAS2	Q92819	552 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ADIPOR1	Q96A54	375 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF524	Q96C55	264 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	TRIM44	Q96DX7	344 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CMTM7	Q96FZ5	175 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	AGAP4	Q96P64	663 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	SORT1	Q99523	831 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	LPAR4	Q99677	370 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	TREX2	Q9BQ50	279 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	TUBA1C	Q9BQE3	449 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	TBCD	Q9BTW9	1192 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	KRTAP1-5	Q9BYS1	174 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CNOT10	Q9H9A5	744 aa	Known RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	CXorf21	Q9HAI6	301 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms