RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 METTL17Q9H7H0 456 aaPredicted RBP15.32■□□□□ 0.04
NUP50-218ENST00000493456 DYSFO75923 2080 aa15.32■□□□□ 0.04
NUP50-218ENST00000493456 AQP7P3A6NL99 342 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 FAAHO00519 579 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 RNASET2O00584 256 aaKnown RBP15.31■□□□□ 0.04
NUP50-218ENST00000493456 LGI1O95970 557 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 IGKV3-15P01624 115 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 OR12D1P0DN82 309 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 HOXB1P14653 301 aaPredicted RBP15.31■□□□□ 0.04
NUP50-218ENST00000493456 UQCRBP14927 111 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 IFNGR1P15260 489 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 EGR1P18146 543 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 NPR2P20594 1047 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 TACR3P29371 465 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 CALCRP30988 508 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 PLAURQ03405 335 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 FUT5Q11128 374 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 PGS1Q32NB8 556 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 GPAT4Q86UL3 456 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 CLECL1Q8IZS7 167 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 CLEC4FQ8N1N0 589 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 C3orf56Q8N813 242 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 UBASH3BQ8TF42 649 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 ZNF418Q8TF45 676 aaPredicted RBP15.31■□□□□ 0.04
NUP50-218ENST00000493456 DOK1Q99704 481 aa15.31■□□□□ 0.04
NUP50-218ENST00000493456 ZC3H12DA2A288 527 aaKnown RBP15.3■□□□□ 0.04
NUP50-218ENST00000493456 CLDN24A6NM45 220 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 KRT4P19013 534 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 SH3BGRP55822 239 aaPredicted RBP15.3■□□□□ 0.04
NUP50-218ENST00000493456 MAD2L1Q13257 205 aaPredicted RBP15.3■□□□□ 0.04
NUP50-218ENST00000493456 CCNIQ14094 377 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 TRIP10Q15642 601 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 TNFAIP8L2Q6P589 184 aaPredicted RBP15.3■□□□□ 0.04
NUP50-218ENST00000493456 SVOPLQ8N434 492 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 TMEM99Q8N816 258 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 OR4A15Q8NGL6 344 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 BCL2L2Q92843 193 aaPredicted RBP15.3■□□□□ 0.04
NUP50-218ENST00000493456 ZG16BQ96DA0 208 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 C3orf30Q96M34 536 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 ALKBH3Q96Q83 286 aaPredicted RBP15.3■□□□□ 0.04
NUP50-218ENST00000493456 TXLNGYQ9BZA5 131 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 PPCSQ9HAB8 311 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 DYNLRB1Q9NP97 96 aa15.3■□□□□ 0.04
NUP50-218ENST00000493456 LIPT2A6NK58 231 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 FAM157AC9JC47 383 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 AP3D1O14617 1153 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 AKR7A3O95154 331 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 VAMP5O95183 116 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 G6PDP11413 515 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 THBS4P35443 961 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 CLDN8P56748 225 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 POU3F1Q03052 451 aaPredicted RBP15.29■□□□□ 0.04
NUP50-218ENST00000493456 HGFACQ04756 655 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 LGALS3BPQ08380 585 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 CEACAM7Q14002 265 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 OR7A5Q15622 319 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 ADRM1Q16186 407 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 OR4F3Q6IEY1 312 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 SPATA21Q7Z572 469 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 IFT20Q8IY31 132 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 ZCCHC24Q8N2G6 241 aaKnown RBP15.29■□□□□ 0.04
NUP50-218ENST00000493456 AGR3Q8TD06 166 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 FAM216AQ8WUB2 273 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 CNOT9Q92600 299 aaKnown RBP15.29■□□□□ 0.04
NUP50-218ENST00000493456 RAB8BQ92930 207 aa15.29■□□□□ 0.04
NUP50-218ENST00000493456 TMEM89A2RUT3 159 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 NR5A2O00482 541 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 SKAP2O75563 359 aaPredicted RBP15.28■□□□□ 0.04
NUP50-218ENST00000493456 UQCRC2P22695 453 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 SELENOPP49908 381 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 IL1RL1Q01638 556 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 GPAT3Q53EU6 434 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 TMEM225Q6GV28 225 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 USP43Q70EL4 1123 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 C4orf33Q8N1A6 199 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 OR8J2Q8NGG1 315 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 CKAP2Q8WWK9 683 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 GCDHQ92947 438 aaPredicted RBP15.28■□□□□ 0.04
NUP50-218ENST00000493456 TUBGCP3Q96CW5 907 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 LINC00470Q9BZP3 86 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 SEC61A2Q9H9S3 476 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 ASIC5Q9NY37 505 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 NOP53Q9NZM5 478 aaKnown RBP15.28■□□□□ 0.04
NUP50-218ENST00000493456 PRDM4Q9UKN5 801 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 GRIP1Q9Y3R0 1128 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 SPEF1Q9Y4P9 236 aa15.28■□□□□ 0.04
NUP50-218ENST00000493456 TRRAPQ9Y4A5 3859 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 A0A096LPE4 126 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 A0A1W2PPZ6 126 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TMEM129A0AVI4 362 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 CFAP73A6NFT4 308 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 KCNAB3O43448 404 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 FAM153BP0C7A2 387 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 CXCR1P25024 350 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 ALDH3A1P30838 453 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 SERPINB5P36952 375 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TUBA1BP68363 451 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TUBA4AP68366 448 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 GNA13Q14344 377 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 GSTA3Q16772 222 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms