RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 LINC01387J3KSC0 135 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 ZNF208O43345 1280 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 EFNA2O43921 213 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 WDR1O75083 606 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 AHSA1O95433 338 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 IFI30P13284 250 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 GABRA1P14867 456 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 CHMP24386 653 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 LIMS1P48059 325 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 STARP49675 285 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 HMGA2P52926 109 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 GFRA1P56159 465 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 NUP107P57740 925 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 RAC1P63000 192 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 PMPCAQ10713 525 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 TMEM176BQ3YBM2 270 aaPredicted RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 SYT14P1Q58G82 188 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 OTUD3Q5T2D3 398 aaPredicted RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 C1orf140Q5VVS0 124 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 FBXW10Q5XX13 1052 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 LINC00114Q6XXX2 140 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 MEX3DQ86XN8 651 aaKnown RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 UBQLNLQ8IYU4 475 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 CDK20Q8IZL9 346 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 RNF113BQ8IZP6 322 aaKnown RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 OR9Q2Q8NGE9 314 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 NEIL3Q8TAT5 605 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 STK35Q8TDR2 534 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 SLC25A43Q8WUT9 341 aaPredicted RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 ABTB1Q969K4 478 aaPredicted RBP12.06□□□□□ -0.48
MSH6-208ENST00000493177 EME1Q96AY2 570 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 SGTBQ96EQ0 304 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 NRBF2Q96F24 287 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 OR5B2Q96R09 309 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 KIF17Q9P2E2 1029 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 OAZ3Q9UMX2 235 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 AP4B1Q9Y6B7 739 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 LRRK2Q5S007 2527 aa12.06□□□□□ -0.48
MSH6-208ENST00000493177 TRAV36DV7A0A075B6V5 113 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 ENO4A6NNW6 628 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 EIF1AYO14602 144 aaKnown RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 ACTL6AO96019 429 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 BMP7P18075 431 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 PRKACGP22612 351 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 CBLP22681 906 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 FKBP2P26885 142 aaKnown RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 GTF2E2P29084 291 aaKnown RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 SHC1P29353 583 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 CHRNB4P30926 498 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 IDUAP35475 653 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 GPR4P46093 362 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 RPS5P46782 204 aaKnown RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 MAP2K6P52564 334 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 LSM11P83369 360 aaKnown RBP eCLIP12.05□□□□□ -0.48
MSH6-208ENST00000493177 IL1RL1Q01638 556 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 SRYQ05066 204 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 C1orf185Q5T7R7 199 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 C5orf46Q6UWT4 87 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 RPRMLQ8N4K4 120 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 ATG16L2Q8NAA4 619 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 AQP11Q8NBQ7 271 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 SLC25A36Q96CQ1 311 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 KTI12Q96EK9 354 aaPredicted RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 KLHL15Q96M94 604 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 CIB1Q99828 191 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 FUZQ9BT04 418 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 C9orf16Q9BUW7 83 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 TAPBPLQ9BX59 468 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 SLC19A3Q9BZV2 496 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 SPRR3Q9UBC9 169 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 RNF6Q9Y252 685 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 TMEM5Q9Y2B1 443 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 MAGED1Q9Y5V3 778 aaPredicted RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 SETXQ7Z333 2677 aaKnown RBP12.05□□□□□ -0.48
MSH6-208ENST00000493177 CACNA1CQ13936 2221 aa12.05□□□□□ -0.48
MSH6-208ENST00000493177 A0A1W2PNR3 127 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 PDLIM1O00151 329 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 TNFSF11O14788 317 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 CH25HO95992 272 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 POU2F1P14859 743 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 CLK1P49759 484 aaKnown RBP12.04□□□□□ -0.48
MSH6-208ENST00000493177 CLDN20P56880 219 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 OR2B6P58173 313 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 EGR4Q05215 589 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 PRKCDQ05655 676 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 SF3B4Q15427 424 aaKnown RBP eCLIP12.04□□□□□ -0.48
MSH6-208ENST00000493177 OR7A5Q15622 319 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 LRRC36Q1X8D7 754 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 EMC4Q5J8M3 183 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 PDSS1Q5T2R2 415 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 LPCAT4Q643R3 524 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 PGBD2Q6P3X8 592 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 CCDC71Q8IV32 467 aaPredicted RBP12.04□□□□□ -0.48
MSH6-208ENST00000493177 MCEMP1Q8IX19 187 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 MARVELD2Q8N4S9 558 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms