RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 GPAT4Q86UL3 456 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 POMGNT2Q8NAT1 580 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 BCL2L2Q92843 193 aaPredicted RBP11.88□□□□□ -0.51
SAMM50-204ENST00000493161 PMM1Q92871 262 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 SNX18Q96RF0 628 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 KATNB1Q9BVA0 655 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 TMEM45AQ9NWC5 275 aa11.88□□□□□ -0.51
SAMM50-204ENST00000493161 TMEM129A0AVI4 362 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 TLDC2A0PJX2 215 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 SH3PXD2BA1X283 911 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 AGAP5A6NIR3 686 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 UPK3AO75631 287 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 KRT33AO76009 404 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 VENTXO95231 258 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 AGR2O95994 175 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 CRYAAP02489 173 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 CHRM4P08173 479 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 TACSTD2P09758 323 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 APEX1P27695 318 aaKnown RBP11.87□□□□□ -0.51
SAMM50-204ENST00000493161 THBS4P35443 961 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
SAMM50-204ENST00000493161 SLC1A3P43003 542 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 KHKP50053 298 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 PPOXP50336 477 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 CHN2P52757 468 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 SVOPLQ8N434 492 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 LINC01356Q8N9X3 169 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 ZNF540Q8NDQ6 660 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 OR8J2Q8NGG1 315 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 TCP10LQ8TDR4 215 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 OIT3Q8WWZ8 545 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 NEURL3Q96EH8 262 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 ALKBH3Q96Q83 286 aaPredicted RBP11.87□□□□□ -0.51
SAMM50-204ENST00000493161 DOK1Q99704 481 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 KCNS3Q9BQ31 491 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 RAB1BQ9H0U4 201 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 SLC38A1Q9H2H9 487 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 OBP2BQ9NPH6 170 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 MKS1Q9NXB0 559 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 ASIC5Q9NY37 505 aa11.87□□□□□ -0.51
SAMM50-204ENST00000493161 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
SAMM50-204ENST00000493161 CRNNQ9UBG3 495 aaPredicted RBP11.87□□□□□ -0.51
SAMM50-204ENST00000493161 PRSS51A0A1B0GVH4 220 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 ZNF503-AS2A6NEH8 195 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 hCG_2039718K7EN88 272 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 ITM2AO43736 263 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 PDE5AO76074 875 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 IGLV1-44P01699 117 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 GPIP06744 558 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 CREB1P16220 341 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 CDH15P55291 814 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 EPS8Q12929 822 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 CCNIQ14094 377 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 MRPL2Q5T653 305 aaKnown RBP11.86□□□□□ -0.51
SAMM50-204ENST00000493161 C1QTNF12Q5T7M4 302 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 C12orf54Q6X4T0 127 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 RINLQ6ZS11 566 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 CREB3L2Q70SY1 520 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 RNF130Q86XS8 419 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 SLC35A5Q9BS91 424 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 SF3B5Q9BWJ5 86 aaKnown RBP11.86□□□□□ -0.51
SAMM50-204ENST00000493161 AKTIPQ9H8T0 292 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 ADPRHL2Q9NX46 363 aa11.86□□□□□ -0.51
SAMM50-204ENST00000493161 MARCOQ9UEW3 520 aaPredicted RBP11.86□□□□□ -0.51
SAMM50-204ENST00000493161 ARPC4-TTLL3A0A0A6YYG9 625 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 CFAP73A6NFT4 308 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 ZNF587BE7ETH6 402 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 FAAHO00519 579 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 GKN3PP0CG01 181 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 RPS4Y1P22090 263 aaKnown RBP11.85□□□□□ -0.51
SAMM50-204ENST00000493161 CHI3L1P36222 383 aaPredicted RBP11.85□□□□□ -0.51
SAMM50-204ENST00000493161 UBE2NP61088 152 aaKnown RBP11.85□□□□□ -0.51
SAMM50-204ENST00000493161 HPCAP84074 193 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 MAD2L1Q13257 205 aaPredicted RBP11.85□□□□□ -0.51
SAMM50-204ENST00000493161 RIN1Q13671 783 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 CASP8Q14790 479 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 MAPK11Q15759 364 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 PDCD2Q16342 344 aaPredicted RBP11.85□□□□□ -0.51
SAMM50-204ENST00000493161 SPANXN4Q5MJ08 99 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 TMEM225Q6GV28 225 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 NIPAL3Q6P499 406 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 SPATA21Q7Z572 469 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 EPHX4Q8IUS5 362 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 CMIPQ8IY22 773 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 CDK20Q8IZL9 346 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 ZNF786Q8N393 782 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 HPS1Q92902 700 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 TRNT1Q96Q11 434 aaKnown RBP11.85□□□□□ -0.51
SAMM50-204ENST00000493161 DPY30Q9C005 99 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 OCEL1Q9H607 264 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 PPCSQ9HAB8 311 aa11.85□□□□□ -0.51
SAMM50-204ENST00000493161 TMEM229AB2RXF0 380 aa11.84□□□□□ -0.51
SAMM50-204ENST00000493161 SPRY1O43609 319 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-204ENST00000493161 BPGMP07738 259 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms