RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	OR10H5	Q8NGA6	315 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	EBF4	Q9BQW3	602 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	INPP5K	Q9BT40	448 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	CCDC28B	Q9BUN5	200 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	C1QTNF6	Q9BXI9	259 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	FKRP	Q9H9S5	495 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	TCF7L2	Q9NQB0	619 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC17A5	Q9NRA2	495 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC7A10	Q9NS82	523 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	ATP23	Q9Y6H3	246 aa		13.46	□□□□□ -0.25
MRPL55-231	ENST00000492170	FBN3	Q75N90	2809 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	ZC3H12D	A2A288	527 aa	Known RBP	13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	FAM234B	A2RU67	622 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170		A8MV72	311 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170		H7C417	338 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	UBD	O15205	165 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	POLR3G	O15318	223 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	KRT75	O95678	551 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	GPI	P06744	558 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	MPG	P29372	298 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	AQP5	P55064	265 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	COX20	Q5RI15	118 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	TSPO2	Q5TGU0	170 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	NXN	Q6DKJ4	435 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	PODNL1	Q6PEZ8	512 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	WDR31	Q8NA23	367 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	PNPT1	Q8TCS8	783 aa	Known RBP	13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	TMEM45B	Q96B21	275 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	CCDC134	Q9H6E4	229 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	ZIM2	Q9NZV7	527 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	P2RX2	Q9UBL9	471 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	RTTN	Q86VV8	2226 aa		13.45	□□□□□ -0.26
MRPL55-231	ENST00000492170	ALPK2	Q86TB3	2170 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	RFXANK	O14593	260 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	WNT11	O96014	354 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	GSN	P06396	782 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	SLC25A16	P16260	332 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	CXCR1	P25024	350 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	PRPS1	P60891	318 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	CHRNB3	Q05901	458 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	OR7A5	Q15622	319 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	CHRFAM7A	Q494W8	412 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	LIN52	Q52LA3	116 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	POMGNT2	Q8NAT1	580 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	OR9K2	Q8NGE7	335 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	SIKE1	Q9BRV8	207 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	REPIN1	Q9BWE0	567 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	SF3B5	Q9BWJ5	86 aa	Known RBP	13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	ADAM19	Q9H013	955 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	CALML5	Q9NZT1	146 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170	PRDM4	Q9UKN5	801 aa		13.44	□□□□□ -0.26
MRPL55-231	ENST00000492170		A0A096LNT2	108 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	CDHR4	A6H8M9	788 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	LIPT2	A6NK58	231 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	AQP7P3	A6NL99	342 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	CSF3	P09919	207 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	COPZ1	P61923	177 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	SLC25A3	Q00325	362 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	LOXL1	Q08397	574 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	CEACAM7	Q14002	265 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	TMEM249	Q2WGJ8	235 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	ELOA3B	Q3SY89	546 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	C6orf52	Q5T4I8	152 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	AAED1	Q7RTV5	226 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	ZNF525	Q8N782	197 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	ELOA3	Q8NG57	546 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	OR52P1P	Q8NH57	321 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	FAM168A	Q92567	244 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	HTRA1	Q92743	480 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	TNFRSF13C	Q96RJ3	184 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	TAPBPL	Q9BX59	468 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	PIF1	Q9H611	641 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	CACYBP	Q9HB71	228 aa	Known RBP	13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	RLIM	Q9NVW2	624 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	PMF1-BGLAP	U3KQ54	211 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	MXRA5	Q9NR99	2828 aa		13.43	□□□□□ -0.26
MRPL55-231	ENST00000492170	RNF212B	A8MTL3	300 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	GPRIN2	O60269	458 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	SLC22A3	O75751	556 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	KRT33A	O76009	404 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	AKR7A3	O95154	331 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	IL6	P05231	212 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	GKN3P	P0CG01	181 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	CDH2	P19022	906 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	APOBEC3A	P31941	199 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	CRISP3	P54108	245 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	VLDLR	P98155	873 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	WBP2NL	Q6ICG8	309 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	ZNF836	Q6ZNA1	936 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	MSANTD1	Q6ZTZ1	278 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	GPAT4	Q86UL3	456 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	LSR	Q86X29	649 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	VRK2	Q86Y07	508 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	MIER2	Q8N344	545 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	CADM2	Q8N3J6	435 aa		13.42	□□□□□ -0.26
MRPL55-231	ENST00000492170	TMEM99	Q8N816	258 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms