RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CASP12Q6UXS9 341 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NOXA1Q86UR1 476 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PRR22Q8IZ63 422 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 BCORP1Q8N888 145 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 PROKR2Q8NFJ6 384 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 NR4A3Q92570 626 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-219ENST00000491747 SH2D2AQ9NP31 389 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 TIGARQ9NQ88 270 aa8.57□□□□□ -1.04
BRCA1-219ENST00000491747 A8MV72 311 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 MYL12BO14950 172 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 TBX19O60806 448 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 LGI1O95970 557 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 IL1AP01583 271 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 FBXO45P0C2W1 286 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ARAFP10398 606 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 MEOX1P50221 254 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 CHRNEQ04844 493 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 GPAT3Q53EU6 434 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 RNLSQ5VYX0 342 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ZNF770Q6IQ21 691 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 XKRXQ6PP77 449 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 TMEM107Q6UX40 140 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 GPALPP1Q8IXQ4 340 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 CLDN22Q8N7P3 220 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 GDPD1Q8N9F7 314 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 OR8J1Q8NGP2 316 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SLC22A8Q8TCC7 542 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SLC7A6Q92536 515 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SLC25A46Q96AG3 418 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 TTYH2Q9BSA4 534 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 UCK2Q9BZX2 261 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 PROK2Q9HC23 129 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 GIMAP4Q9NUV9 329 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ZGRF1Q86YA3 2104 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 FLNCQ14315 2725 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 FABP12A6NFH5 140 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 NOTOA8MTQ0 251 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ZNHIT1O43257 154 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 PLOD3O60568 738 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 TMCC2O75069 709 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SOAT1P35610 550 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 MC3RP41968 323 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 FRKP42685 505 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 FBXW4P57775 412 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 GNG2P59768 71 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ARPC4P59998 168 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 LARS2Q15031 903 aaKnown RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 TAB1Q15750 504 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 GLYR1Q49A26 553 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 DDI2Q5TDH0 399 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 RTL4Q6ZR62 310 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SIAH3Q8IW03 269 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SAMD14Q8IZD0 417 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 NANOGP1Q8N7R0 232 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ST6GALNAC3Q8NDV1 305 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 OR10G3Q8NGC4 313 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 OR5M3Q8NGP4 307 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 SPACA9Q96E40 222 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ZNF764Q96H86 408 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 RHCGQ9UBD6 479 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 MGAT4BQ9UQ53 548 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 KLF13Q9Y2Y9 288 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 NPFFR2Q9Y5X5 522 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 CHCHD2Q9Y6H1 151 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-219ENST00000491747 NINQ8N4C6 2090 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 BAHCC1Q9P281 2608 aa8.56□□□□□ -1.04
BRCA1-219ENST00000491747 ANKUB1A6NFN9 424 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 H3BN98 237 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PDPK1O15530 556 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 NDUFB5O43674 189 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 TPST2O60704 377 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 EDN3P14138 238 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 CNR1P21554 472 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 MYL9P24844 172 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DNASE1L1P49184 302 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DSTNP60981 165 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 FOXD4Q12950 439 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-219ENST00000491747 HSPB3Q12988 150 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DOC2BQ14184 412 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 NTRK2Q16620 822 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DUSP7Q16829 419 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 SLC35F1Q5T1Q4 408 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 HLA-DQA1Q5Y7H0 255 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 REEP3Q6NUK4 255 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 NPSR1Q6W5P4 371 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PHC2Q8IXK0 858 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 RDH10Q8IZV5 341 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 C17orf47Q8NEP4 570 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 OR2M7Q8NG81 312 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 OR5AK3PQ8NH89 298 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 AP3S1Q92572 193 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 MTERF3Q96E29 417 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DIRAS2Q96HU8 199 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 MMP28Q9H239 520 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 FOLH1BQ9HBA9 442 aa8.55□□□□□ -1.04
BRCA1-219ENST00000491747 DNAJC27Q9NZQ0 273 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms