RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PLAUP00749 431 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 HOXB9P17482 250 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 PRPS1P60891 318 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 H3F3AP84243 136 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 PPP2R2BQ00005 443 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC17A1Q14916 467 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 AGKQ53H12 422 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 C1orf140Q5VVS0 124 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC2A7Q6PXP3 512 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 DPP10Q8N608 796 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 RNF217Q8TC41 542 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 AURKBQ96GD4 344 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 ADAD1Q96M93 576 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 TRIM2Q9C040 744 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 NPHS2Q9NP85 383 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC52A3Q9NQ40 469 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF446Q9NWS9 450 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 NDUFAF1Q9Y375 327 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 FLVCR1Q9Y5Y0 555 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 A0A0G2JND7 137 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 LIPT2A6NK58 231 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 ABCD4O14678 606 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 SMAD7O15105 426 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 ANGPT2O15123 496 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 AKAP8O43823 692 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 AKR7A3O95154 331 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 NPPAP01160 153 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 PNMTP11086 282 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 GPX2P18283 190 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 MPGP29372 298 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 PRKAR1BP31321 381 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 CDH11P55287 796 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 CDK6Q00534 326 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 LTBQ06643 244 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 C1DQ13901 141 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 MFSD13AQ14CX5 517 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 NRF1Q16656 503 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 KRTAP21-3Q3LHN1 58 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 COQ5Q5HYK3 327 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 NET1Q7Z628 596 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 FBXL14Q8N1E6 418 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 OR52N5Q8NH56 324 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 DNAJA4Q8WW22 397 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 TMEM45BQ96B21 275 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 GSX1Q9H4S2 264 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF385DQ9H6B1 395 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 TMEM38AQ9H6F2 299 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 C12orf10Q9HB07 376 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 TMEM27Q9HBJ8 222 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 OBP2BQ9NPH6 170 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC6A13Q9NSD5 602 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 ANGPT4Q9Y264 503 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 C2CD3Q4AC94 2353 aa14.61□□□□□ -0.07
PDLIM2-217ENST00000491330 ITPR3Q14573 2671 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 DPRXA6NFQ7 191 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 AQP7P3A6NL99 342 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 VSTM5A8MXK1 200 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC22A2O15244 555 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 TP53P04637 393 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 HEXAP06865 529 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 IMPDH2P12268 514 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF43P17038 809 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 ACAA2P42765 397 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF83P51522 516 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 UBE2NP61088 152 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 IL1RL1Q01638 556 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 CHRNB3Q05901 458 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 RBBP4Q09028 425 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 MAPRE2Q15555 327 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 GTDC1Q4AE62 458 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 RPS26P11Q5JNZ5 115 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 RANBP3LQ86VV4 465 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC30A8Q8IWU4 369 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 CLIP4Q8N3C7 705 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 OR9K2Q8NGE7 335 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 MFSD8Q8NHS3 518 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC38A4Q969I6 547 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 COX4I2Q96KJ9 171 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 MUS81Q96NY9 551 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 EPYCQ99645 322 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 SLCO5A1Q9H2Y9 848 aa14.6□□□□□ -0.07
PDLIM2-217ENST00000491330 TRBV5-3A0A0A0MS03 114 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF587BE7ETH6 402 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 M0R1B8 84 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 ADAM11O75078 769 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 VEZF1Q14119 521 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 GABRA6Q16445 453 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 CLEC12BQ2HXU8 276 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 HMBOX1Q6NT76 420 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 TMEM99Q8N816 258 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 KBTBD8Q8NFY9 601 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 OR52E4Q8NGH9 312 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 NFKBIDQ8NI38 313 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC25A36Q96CQ1 311 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC47A1Q96FL8 570 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 SH3GL1Q99961 368 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 GRIP2Q9C0E4 1043 aa14.59□□□□□ -0.07
PDLIM2-217ENST00000491330 ZC3H12DA2A288 527 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-217ENST00000491330 BBIP1A8MTZ0 92 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms