RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ZNF407Q9C0G0 2248 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 KIAA1549Q9HCM3 1950 aa16.73■□□□□ 0.27
MCF2L-230ENST00000491028 NBEAQ8NFP9 2946 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 EFCAB9A8MZ26 197 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 PDLIM1O00151 329 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 WISP2O76076 250 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 SAGP10523 405 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-230ENST00000491028 EDN3P14138 238 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 MAKP20794 623 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 PRKACGP22612 351 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 GPR4P46093 362 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 SUCLG1P53597 346 aaKnown RBP16.72■□□□□ 0.27
MCF2L-230ENST00000491028 CLDN15P56746 228 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 NUP107P57740 925 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 RAC3P60763 192 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 SLC35A1P78382 337 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 PPP2R2BQ00005 443 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 HSF1Q00613 529 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 LTBQ06643 244 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 C19orf57Q0VDD7 668 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 COX10Q12887 443 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 DAG1Q14118 895 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 OR7A5Q15622 319 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 ANKDD1AQ495B1 522 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 CD300LDQ6UXZ3 194 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 ZBTB49Q6ZSB9 765 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 LSRQ86X29 649 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-230ENST00000491028 OR10D3Q8NH80 312 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 CPNE4Q96A23 557 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-230ENST00000491028 ZHX1-C8orf76Q96EF9 292 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 MOGAT1Q96PD6 335 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 ASPNQ9BXN1 380 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 CAMK2AQ9UQM7 478 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 FAM208BQ5VWN6 2430 aa16.72■□□□□ 0.27
MCF2L-230ENST00000491028 NPIPA2E9PIF3 369 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 NPIPA3F8WFD2 350 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 EI24O14681 340 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 EIF1BO60739 113 aaKnown RBP16.71■□□□□ 0.27
MCF2L-230ENST00000491028 HPRP00739 348 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 ASAH2BP0C7U1 165 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 FUT1P19526 365 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 PEX2P28328 305 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 PTGS2P35354 604 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 EIF1AXP47813 144 aaKnown RBP16.71■□□□□ 0.27
MCF2L-230ENST00000491028 CARD18P57730 90 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 OR2B6P58173 313 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 FBXW10Q5XX13 1052 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 LPCAT4Q643R3 524 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 CHERPQ8IWX8 916 aaKnown RBP16.71■□□□□ 0.27
MCF2L-230ENST00000491028 CBR4Q8N4T8 237 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 PACRGLQ8N7B6 248 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 SCAIQ8N9R8 606 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 ADPRHL1Q8NDY3 354 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 CPT1CQ8TCG5 803 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 OSTF1Q92882 214 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 SLC25A36Q96CQ1 311 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 DNAJA3Q96EY1 480 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 GPA33Q99795 319 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 NIPSNAP1Q9BPW8 284 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 TNFRSF10DQ9UBN6 386 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 POFUT2Q9Y2G5 429 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 MED12Q93074 2177 aa16.71■□□□□ 0.27
MCF2L-230ENST00000491028 DNAJC13O75165 2243 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 UNC119BA6NIH7 251 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 LRRN3E7EW58 273 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 H0YC42 278 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 SOCS2O14508 198 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 CDC42EP2O14613 210 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 CXCL13O43927 109 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 HIST1H2ABP04908 130 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 GRPRP30550 384 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 DAPP51397 102 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 ALDH3A2P51648 485 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 TPD52P55327 224 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-230ENST00000491028 SRYQ05066 204 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 RBPJQ06330 500 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 SGCBQ16585 318 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 ZNF239Q16600 458 aaKnown RBP16.7■□□□□ 0.26
MCF2L-230ENST00000491028 KDM4DQ6B0I6 523 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 PPP4R4Q6NUP7 873 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 PAQR6Q6TCH4 344 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 RASSF6Q6ZTQ3 369 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 HIST3H2AQ7L7L0 130 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 CHMP1BQ7LBR1 199 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 NANOGNBQ7Z5D8 188 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 FGD2Q7Z6J4 655 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 OAFQ86UD1 273 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 OR5J2Q8NH18 312 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 HIST1H2ACQ93077 130 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 GTPBP3Q969Y2 492 aaKnown RBP16.7■□□□□ 0.26
MCF2L-230ENST00000491028 RELTQ969Z4 430 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 NAA11Q9BSU3 229 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-230ENST00000491028 UCK2Q9BZX2 261 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 VCX3BQ9H321 246 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 MRPL39Q9NYK5 338 aaKnown RBP16.7■□□□□ 0.26
MCF2L-230ENST00000491028 HIF3AQ9Y2N7 669 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 BSNQ9UPA5 3926 aa16.7■□□□□ 0.26
MCF2L-230ENST00000491028 M0R082 166 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 ALPLP05186 524 aa16.69■□□□□ 0.26
MCF2L-230ENST00000491028 TSPAN19P0C672 248 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms