RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	RAP1A	P62834	184 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MRPS15	P82914	257 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	DAB2	P98082	770 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SSBP1	Q04837	148 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MXD1	Q05195	221 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	EXOSC7	Q15024	291 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TOMM20	Q15388	145 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CT45A2	Q5DJT8	189 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CCNJ	Q5T5M9	372 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SFXN4	Q6P4A7	337 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CNIH2	Q6PI25	160 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SHF	Q7M4L6	423 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	BTLA	Q7Z6A9	289 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	NRARP	Q7Z6K4	114 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	PLCZ1	Q86YW0	608 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	LAX1	Q8IWV1	398 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SLC35F2	Q8IXU6	374 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	DND1	Q8IYX4	353 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TCTE3	Q8IZS6	198 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CADM2	Q8N3J6	435 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	OR4F15	Q8NGB8	312 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	OR52E2	Q8NGJ4	325 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	OR8K3	Q8NH51	312 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	OR51A7	Q8NH64	312 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	C16orf52	Q8NHV5	167 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF563	Q8TA94	476 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF417	Q8TAU3	575 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	LMX1A	Q8TE12	382 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	DNASE2B	Q8WZ79	361 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	S100A16	Q96FQ6	103 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	PEX11G	Q96HA9	241 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	KLHL15	Q96M94	604 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	PTCHD1	Q96NR3	888 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TNFRSF13C	Q96RJ3	184 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MAP3K3	Q99759	626 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	WFDC6	Q9BQY6	131 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF649	Q9BS31	505 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MARVELD1	Q9BSK0	173 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	LRRC61	Q9BV99	259 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	GON7	Q9BXV9	100 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ADAM19	Q9H013	955 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SLC6A17	Q9H1V8	727 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SLA2	Q9H6Q3	261 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	RANBP3	Q9H6Z4	567 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	NIPAL2	Q9H841	368 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ADGRL4	Q9HBW9	690 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF304	Q9HCX3	659 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	RXFP3	Q9NSD7	469 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CUTC	Q9NTM9	273 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TAS2R16	Q9NYV7	291 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CARD8	Q9Y2G2	431 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	NUBP2	Q9Y5Y2	271 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MTCH2	Q9Y6C9	303 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		A0A0A6YYH2	397 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833		A0A1B0GX78	115 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	OR6C70	A6NIJ9	312 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833		A6NJ64	397 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833		A8MVM7	634 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ALG1L2	C9J202	215 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	LRRN3	E7EW58	273 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833		M0R129	80 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SCAMP1	O15126	338 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	FRS3	O43559	492 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	HCRTR1	O43613	425 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	NDUFB5	O43674	189 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	FZD7	O75084	574 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF254	O75437	659 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SCGN	O76038	276 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	IL2RA	P01589	272 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	CSF3	P09919	207 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	UCHL1	P09936	223 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ZGLP1	P0C6A0	271 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	GP1BB	P13224	206 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SRM	P19623	302 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	FBL	P22087	321 aa	Known RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	PYCR1	P32322	319 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	MNDA	P41218	407 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	APOBEC1	P41238	236 aa	Known RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	LSS	P48449	732 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	CCR9	P51686	369 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	POLR2H	P52434	150 aa	Known RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SLC37A1	P57057	533 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	NXPH1	P58417	271 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	C17orf67	Q0P5P2	114 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SELENBP1	Q13228	472 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	MAB21L1	Q13394	359 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	CRMP1	Q14194	572 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	CDK5R1	Q15078	307 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	TOMM34	Q15785	309 aa	Predicted RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ALG10	Q5BKT4	473 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ZMAT1	Q5H9K5	638 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	UBE2NL	Q5JXB2	153 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	IDNK	Q5T6J7	187 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF57	Q68EA5	555 aa	Predicted RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	DEGS2	Q6QHC5	323 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	UNQ9370/PRO34162	Q6UXP9	181 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	RHOU	Q7L0Q8	258 aa		5.8	□□□□□ -1.48

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