RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TMEM38AQ9H6F2 299 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 NPAP1Q9NZP6 1156 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 UPB1Q9UBR1 384 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 LEF1Q9UJU2 399 aaPredicted RBP27.63■■■□□ 2.01
LDB1-204ENST00000490751 ZFHX3Q15911 3703 aa27.63■■■□□ 2.01
LDB1-204ENST00000490751 NPIPB7O75200 414 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 SCARB2Q14108 478 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 STK35Q8TDR2 534 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 TMEM45BQ96B21 275 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 Q96MF0 132 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 SPATA5L1Q9BVQ7 753 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 SLC7A10Q9NS82 523 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 TRIM33Q9UPN9 1127 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 LAMP3Q9UQV4 416 aa27.62■■■□□ 2.01
LDB1-204ENST00000490751 ITGA5P08648 1049 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 ZNF672Q499Z4 452 aaPredicted RBP27.61■■■□□ 2.01
LDB1-204ENST00000490751 TSPO2Q5TGU0 170 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 DHRS4L2Q6PKH6 230 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 GPAT4Q86UL3 456 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 COMTD1Q86VU5 262 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 OR52N5Q8NH56 324 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 ZNF385AQ96PM9 386 aaKnown RBP27.61■■■□□ 2.01
LDB1-204ENST00000490751 RPS6KB2Q9UBS0 482 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 NDUFAF1Q9Y375 327 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 CADP27708 2225 aa27.61■■■□□ 2.01
LDB1-204ENST00000490751 A0A0G2JND7 137 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 PDLIM1O00151 329 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 TMCC2O75069 709 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 AHSA1O95433 338 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 SLC6A2P23975 617 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 GABRA6Q16445 453 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 RUNDC3AQ59EK9 446 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 C9orf135Q5VTT2 229 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 TMEM225Q6GV28 225 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 DHDDSQ86SQ9 333 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 ZIC4Q8N9L1 334 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 SIKE1Q9BRV8 207 aa27.6■■■□□ 2.01
LDB1-204ENST00000490751 ZNF701Q9NV72 531 aaPredicted RBP27.6■■■□□ 2.01
LDB1-204ENST00000490751 ELOA3DA6NLF2 546 aaPredicted RBP27.59■■■□□ 2.01
LDB1-204ENST00000490751 ANGPT2O15123 496 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 TPST1O60507 370 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 INHBBP09529 407 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 PAX1P15863 534 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 HTR2AP28223 471 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 AQP1P29972 269 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 P2RY4P51582 365 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 RPS4XP62701 263 aaKnown RBP27.59■■■□□ 2.01
LDB1-204ENST00000490751 ADRM1Q16186 407 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 ELOA3BQ3SY89 546 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 GLIPR1L2Q4G1C9 344 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 OR7E24Q6IFN5 339 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 AAED1Q7RTV5 226 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 BIVMQ86UB2 503 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 ELOA3Q8NG57 546 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 MUS81Q96NY9 551 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 SMR3AQ99954 134 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 TRIM2Q9C040 744 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 SLC25A15Q9Y619 301 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 USF3Q68DE3 2245 aa27.59■■■□□ 2.01
LDB1-204ENST00000490751 A0A1W2PR80 420 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 EGR4Q05215 589 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 C6orf89Q6UWU4 347 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 RETREG3Q86VR2 466 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 DPP10Q8N608 796 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 HIPK4Q8NE63 616 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 ZNF607Q96SK3 696 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 PTDSS2Q9BVG9 487 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 PIF1Q9H611 641 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 NF1P21359 2839 aa27.58■■■□□ 2.01
LDB1-204ENST00000490751 ABCD4O14678 606 aa27.57■■■□□ 2
LDB1-204ENST00000490751 VAMP5O95183 116 aa27.57■■■□□ 2
LDB1-204ENST00000490751 SOD3P08294 240 aa27.57■■■□□ 2
LDB1-204ENST00000490751 DANCRP0C864 163 aa27.57■■■□□ 2
LDB1-204ENST00000490751 RPS5P46782 204 aaKnown RBP27.57■■■□□ 2
LDB1-204ENST00000490751 LSMEM1Q8N8F7 131 aa27.57■■■□□ 2
LDB1-204ENST00000490751 MFSD8Q8NHS3 518 aa27.57■■■□□ 2
LDB1-204ENST00000490751 SMAP2Q8WU79 429 aaPredicted RBP27.57■■■□□ 2
LDB1-204ENST00000490751 SLC25A36Q96CQ1 311 aa27.57■■■□□ 2
LDB1-204ENST00000490751 ANKRD27Q96NW4 1050 aa27.57■■■□□ 2
LDB1-204ENST00000490751 AMBRA1Q9C0C7 1298 aa27.57■■■□□ 2
LDB1-204ENST00000490751 SLCO5A1Q9H2Y9 848 aa27.57■■■□□ 2
LDB1-204ENST00000490751 C12orf10Q9HB07 376 aa27.57■■■□□ 2
LDB1-204ENST00000490751 ANGPT4Q9Y264 503 aa27.57■■■□□ 2
LDB1-204ENST00000490751 A0A1B0GWA3 101 aa27.56■■■□□ 2
LDB1-204ENST00000490751 PRORSD1PA6NEY8 169 aa27.56■■■□□ 2
LDB1-204ENST00000490751 SHISA9B4DS77 424 aa27.56■■■□□ 2
LDB1-204ENST00000490751 FTCDNL1E5RQL4 147 aa27.56■■■□□ 2
LDB1-204ENST00000490751 ZNF83P51522 516 aa27.56■■■□□ 2
LDB1-204ENST00000490751 KTI12Q96EK9 354 aaPredicted RBP27.56■■■□□ 2
LDB1-204ENST00000490751 CGREF1Q99674 301 aa27.56■■■□□ 2
LDB1-204ENST00000490751 PRR14Q9BWN1 585 aa27.56■■■□□ 2
LDB1-204ENST00000490751 RASD1Q9Y272 281 aa27.56■■■□□ 2
LDB1-204ENST00000490751 H7C1Q1 480 aa27.55■■■□□ 2
LDB1-204ENST00000490751 SERPINB7O75635 380 aa27.55■■■□□ 2
LDB1-204ENST00000490751 PNMTP11086 282 aa27.55■■■□□ 2
LDB1-204ENST00000490751 GTF2E2P29084 291 aaKnown RBP27.55■■■□□ 2
LDB1-204ENST00000490751 CDH11P55287 796 aa27.55■■■□□ 2
LDB1-204ENST00000490751 ATP5J2P56134 94 aa27.55■■■□□ 2
LDB1-204ENST00000490751 RGS8P57771 180 aaPredicted RBP27.55■■■□□ 2
LDB1-204ENST00000490751 MTPNP58546 118 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms