RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 HSP90B2PQ58FF3 399 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 RUNDC3AQ59EK9 446 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 Q5PR19 223 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 C5orf46Q6UWT4 87 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 DLEU7Q6UYE1 221 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 AAED1Q7RTV5 226 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 ABHD12BQ7Z5M8 362 aaPredicted RBP15.4■□□□□ 0.06
SEC13-218ENST00000490283 ARMC8Q8IUR7 673 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 DPP10Q8N608 796 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 TMEM99Q8N816 258 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 C11orf65Q8NCR3 313 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 OR9K2Q8NGE7 335 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 OR52E4Q8NGH9 312 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 RNF217Q8TC41 542 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 DNAJA4Q8WW22 397 aaPredicted RBP15.4■□□□□ 0.06
SEC13-218ENST00000490283 FBXW5Q969U6 566 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 PERPQ96FX8 193 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 CGREF1Q99674 301 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 TRIM2Q9C040 744 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 C12orf10Q9HB07 376 aa15.4■□□□□ 0.06
SEC13-218ENST00000490283 TESQ9UGI8 421 aaKnown RBP15.4■□□□□ 0.06
SEC13-218ENST00000490283 MED13LQ71F56 2210 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 ITPR3Q14573 2671 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 TMEM229AB2RXF0 380 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 KRT33AO76009 404 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 PNMTP11086 282 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 BSPH1Q075Z2 132 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 ADAM5Q6NVV9 412 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 KLHL17Q6TDP4 642 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 RANBP3LQ86VV4 465 aaPredicted RBP15.39■□□□□ 0.05
SEC13-218ENST00000490283 SLC30A8Q8IWU4 369 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 POMGNT2Q8NAT1 580 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 MFSD8Q8NHS3 518 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 TMEM45BQ96B21 275 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 SLC25A36Q96CQ1 311 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 ANKRD27Q96NW4 1050 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 IKZF5Q9H5V7 419 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 ZNF385DQ9H6B1 395 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 TMEM27Q9HBJ8 222 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 RASD1Q9Y272 281 aa15.39■□□□□ 0.05
SEC13-218ENST00000490283 OR2T1O43869 369 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 RPS5P46782 204 aaKnown RBP15.38■□□□□ 0.05
SEC13-218ENST00000490283 MTPNP58546 118 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 RPS4XP62701 263 aaKnown RBP15.38■□□□□ 0.05
SEC13-218ENST00000490283 ALG10BQ5I7T1 473 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 C6orf89Q6UWU4 347 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 PRSS57Q6UWY2 283 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 TMEM108Q6UXF1 575 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 C10orf111Q8N326 155 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 LSMEM1Q8N8F7 131 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 SLC38A4Q969I6 547 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 GSX2Q9BZM3 304 aa15.38■□□□□ 0.05
SEC13-218ENST00000490283 A0A1B0GWA3 101 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 OR6C65A6NJZ3 312 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 NPIPB7O75200 414 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 VIMP08670 466 aaKnown RBP15.37■□□□□ 0.05
SEC13-218ENST00000490283 NTF4P34130 210 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 PTH2RP49190 550 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 ARFIP2P53365 341 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 CYLC2Q14093 348 aaPredicted RBP15.37■□□□□ 0.05
SEC13-218ENST00000490283 MMEL1Q495T6 779 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 ZNF672Q499Z4 452 aaPredicted RBP15.37■□□□□ 0.05
SEC13-218ENST00000490283 TSPO2Q5TGU0 170 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 FAM91A1Q658Y4 838 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 ULK3Q6PHR2 472 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 KLHL24Q6TFL4 600 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 YTHDF3Q7Z739 585 aaKnown RBP15.37■□□□□ 0.05
SEC13-218ENST00000490283 C17orf78Q8N4C9 275 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 C1orf162Q8NEQ5 155 aaPredicted RBP15.37■□□□□ 0.05
SEC13-218ENST00000490283 OR52N5Q8NH56 324 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 SLC47A1Q96FL8 570 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 RADILQ96JH8 1075 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 SH3GL1Q99961 368 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 SLCO5A1Q9H2Y9 848 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 SLC7A10Q9NS82 523 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 FGFR1OP2Q9NVK5 253 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 FAIMQ9NVQ4 179 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 MGAT4BQ9UQ53 548 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 LAMP3Q9UQV4 416 aa15.37■□□□□ 0.05
SEC13-218ENST00000490283 MAGED1Q9Y5V3 778 aaPredicted RBP15.37■□□□□ 0.05
SEC13-218ENST00000490283 DPRXA6NFQ7 191 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 TPST1O60507 370 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 ITGA5P08648 1049 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 MPGP29372 298 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 IL1RL1Q01638 556 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 MAPRE2Q15555 327 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 ADRM1Q16186 407 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 GABRA6Q16445 453 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 C1QTNF12Q5T7M4 302 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 FAM69AQ5T7M9 428 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 INTS11Q5TA45 600 aaKnown RBP15.36■□□□□ 0.05
SEC13-218ENST00000490283 C9orf135Q5VTT2 229 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 RETREG3Q86VR2 466 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 DEPDC4Q8N2C3 294 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 KBTBD8Q8NFY9 601 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 SLC26A7Q8TE54 656 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 GTPBP3Q969Y2 492 aaKnown RBP15.36■□□□□ 0.05
SEC13-218ENST00000490283 C18orf12Q96KH6 178 aa15.36■□□□□ 0.05
SEC13-218ENST00000490283 MUS81Q96NY9 551 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms