RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RBM14Q96PK6 669 aaKnown RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 CLCC1Q96S66 551 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 MBOAT4Q96T53 435 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 P2RY13Q9BPV8 354 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 NRIP2Q9BQI9 281 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 PARD6BQ9BYG5 372 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 C20orf85Q9H1P6 137 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 NXF3Q9H4D5 531 aaKnown RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 NHEJ1Q9H9Q4 299 aaPredicted RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 MTRF1LQ9UGC7 380 aaKnown RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 FRMPD3Q5JV73 1810 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 PLEKHH1Q9ULM0 1364 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 A0A1B0GUA9 196 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 E9PBE3 544 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 LOC110117498-PIK3R3F6TDL0 507 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 MED7O43513 233 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 TRAF3IP2O43734 574 aaPredicted RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 RAMP3O60896 148 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 KLF8O95600 359 aaPredicted RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 INSP01308 110 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 OPN1MWP04001 364 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 IGHV4-34P06331 123 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 OPN1MW2P0DN77 364 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 OPN1MW3P0DN78 364 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 PCMT1P22061 227 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 DDOSTP39656 456 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 GLP1RP43220 463 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 QARSP47897 775 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 CCT3P49368 545 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 GPM6AP51674 278 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 DLX1P56177 255 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 NCBP1Q09161 790 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 VGLL4Q14135 290 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 CAPRIN1Q14444 709 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 OXA1LQ15070 435 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 MPPED2Q15777 294 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 DMRTC1Q5HYR2 192 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 ZSCAN25Q6NSZ9 544 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 PMF1Q6P1K2 205 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 RFLNAQ6ZTI6 216 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 PGAP1Q75T13 922 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 OR6C4Q8NGE1 309 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 ZNF799Q96GE5 643 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 LINC00167Q96N53 147 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 RPRD1AQ96P16 312 aaPredicted RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 KCNA7Q96RP8 456 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 SECISBP2Q96T21 854 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 NPAS2Q99743 824 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 MRPL45Q9BRJ2 306 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 CRACR2AQ9BSW2 395 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 NAT9Q9BTE0 207 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 TMEM43Q9BTV4 400 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 CAPS2Q9BXY5 557 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 VCX2Q9H322 139 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 THUMPD1Q9NXG2 353 aaKnown RBP2.6□□□□□ -1.99
CD46-216ENST00000490278 CDH9Q9ULB4 789 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 TMCO1Q9UM00 188 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 NEU3Q9UQ49 428 aa2.6□□□□□ -1.99
CD46-216ENST00000490278 IQANK1A0A1B0GTG1 560 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 TCRBV9S1A1TA0A576 114 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 GJE1A6NN92 205 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 A8MXQ7 604 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 AGPAT2O15120 278 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 ZNF208O43345 1280 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 FAM189A1O60320 539 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 OXSR1O95747 527 aaPredicted RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 IL12AP29459 219 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 CCR1P32246 355 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 RDXP35241 583 aaKnown RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 NUDT1P36639 197 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 ARRB1P49407 418 aaPredicted RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 DUSP3P51452 185 aaPredicted RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 ARFIP1P53367 373 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 CRYBB1P53674 252 aaPredicted RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 IL24Q13007 206 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 CHIT1Q13231 466 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 NRF1Q16656 503 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 DUSP7Q16829 419 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 KLHL38Q2WGJ6 581 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 ZNF658BQ4V348 819 aaPredicted RBP2.59□□□□□ -1.99
CD46-216ENST00000490278 BOLA3Q53S33 107 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 MARCH8Q5T0T0 291 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 PDZK1Q5T2W1 519 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 IGFL2Q6UWQ7 119 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 Q6ZN92 141 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 SLC26A11Q86WA9 606 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 FAM71E2Q8N5Q1 922 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 OR52H1Q8NGJ2 320 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 OR5D13Q8NGL4 314 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 RDH5Q92781 318 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 UFD1Q92890 307 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 CXorf40BQ96DE9 158 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 CMTM7Q96FZ5 175 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 SLC41A3Q96GZ6 507 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 TIMD4Q96H15 378 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 SLC38A2Q96QD8 506 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 RASL11BQ9BPW5 248 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 YY1AP1Q9H869 796 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 POLE4Q9NR33 117 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms