RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PAQR9Q6ZVX9 377 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 RTL10Q7L3V2 364 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CXXC5Q7LFL8 322 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CAMKMTQ7Z624 323 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CEACAM19Q7Z692 300 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CTU1Q7Z7A3 348 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 PXKQ7Z7A4 578 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 GPC2Q8N158 579 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 ZBTB2Q8N680 514 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 IQCF1Q8N6M8 205 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF614Q8N883 585 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 UBAC2Q8NBM4 344 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4A4PQ8NGN8 299 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 OR56A3Q8NH54 315 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 OR52I2Q8NH67 350 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 NFKBIDQ8NI38 313 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 ABHD4Q8TB40 342 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 ST7LQ8TDW4 575 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CYB5D2Q8WUJ1 264 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 LCN9Q8WX39 176 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 MRPS31Q92665 395 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 EDAQ92838 391 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 R3HDM4Q96D70 268 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 MED8Q96G25 268 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 TCTN2Q96GX1 697 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 APIPQ96GX9 242 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 APOLD1Q96LR9 279 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 NOL4LQ96MY1 436 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF75AQ96N20 296 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 PKP4Q99569 1192 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 S100A13Q99584 98 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 EGFL8Q99944 293 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 RIOK2Q9BVS4 552 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 OPN3Q9H1Y3 402 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 UBQLN3Q9H347 655 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CERS4Q9HA82 394 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 RDH14Q9HBH5 336 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM27Q9HBJ8 222 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 CRLF2Q9HC73 371 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 GP6Q9HCN6 339 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 WWOXQ9NZC7 414 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 SPG21Q9NZD8 308 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 MRPL15Q9P015 296 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 GDF2Q9UK05 429 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 FBXW2Q9UKT8 454 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 ANGPT4Q9Y264 503 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC35A3Q9Y2D2 325 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 GPR55Q9Y2T6 319 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 MMACHCQ9Y4U1 282 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 TIMM10BQ9Y5J6 103 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 KIAA1217Q5T5P2 1943 aa4.4□□□□□ -1.71
SNRNP40-206ENST00000489853 KCNE1BA0A087WTH5 132 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A0A6YYC8 382 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A1W2PPC1 479 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 OR5H14A6NHG9 310 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 IFITM10A6NMD0 228 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 OR2AT4A6NND4 320 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 IDSB3KWA1 339 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM227AF5H4B4 570 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PYCARD-AS1I3L0S3 204 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 I3L1I5 382 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SYT5O00445 386 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RNASET2O00584 256 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 DVL2O14641 736 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SCAMP2O15127 329 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PLPP2O43688 288 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM127O75204 238 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 NME6O75414 186 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 YIF1AO95070 293 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PCDH8O95206 1070 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 GUCA1CO95843 209 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 TRBC1P01850 177 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 CD5P06127 495 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 OR8G3PP0DMU2 310 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 MYOGP15173 224 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SDHBP21912 280 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 FAUP35544 74 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ECI1P42126 302 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 GNG10P50151 68 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 PRKXP51817 358 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 GFRA1P56159 465 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC26A5P58743 744 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 MAXP61244 160 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RPP30P78346 268 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC10A7Q0GE19 358 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF177Q13360 481 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 SURF2Q15527 256 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 CSRP2Q16527 193 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 VWA2Q5GFL6 755 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RAB41Q5JT25 222 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 NBPF12Q5TAG4 269 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 MFSD14CQ5VZR4 134 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 RNF219Q5W0B1 726 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 C9orf57Q5W0N0 161 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 ADAM5Q6NVV9 412 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 MTFR2Q6P444 385 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 C11orf88Q6PI97 169 aa4.39□□□□□ -1.71
SNRNP40-206ENST00000489853 POMZP3Q6PJE2 187 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms