RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PNPT1Q8TCS8 783 aaKnown RBP10.82□□□□□ -0.68
CPSF3-204ENST00000489403 FBXO17Q96EF6 278 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 TMEM109Q9BVC6 243 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 SF3B5Q9BWJ5 86 aaKnown RBP10.82□□□□□ -0.68
CPSF3-204ENST00000489403 AIG1Q9NVV5 245 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 RLIMQ9NVW2 624 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 LMX1BO60663 402 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 SNUPNO95149 360 aaKnown RBP10.81□□□□□ -0.68
CPSF3-204ENST00000489403 GSNP06396 782 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 PGRP06401 933 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 DBIP07108 87 aaKnown RBP10.81□□□□□ -0.68
CPSF3-204ENST00000489403 GKN3PP0CG01 181 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 NR2F1P10589 423 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 UQCRBP14927 111 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 BGNP21810 368 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 IGFBP5P24593 272 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 PDLIM4P50479 330 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 ANXA11P50995 505 aaKnown RBP10.81□□□□□ -0.68
CPSF3-204ENST00000489403 LGALS3BPQ08380 585 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 BNIP2Q12982 314 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 GNA13Q14344 377 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 GGTLC2Q14390 218 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 ZNF621Q6ZSS3 439 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 IL17RELQ6ZVW7 336 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 GPAT4Q86UL3 456 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 VRK2Q86Y07 508 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 OR1K1Q8NGR3 316 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 AURKBQ96GD4 344 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-204ENST00000489403 ALKBH3Q96Q83 286 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-204ENST00000489403 SHARPINQ9H0F6 387 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 MTHFD2LQ9H903 347 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-204ENST00000489403 PNPOQ9NVS9 261 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 FKBP7Q9Y680 259 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 MALRD1Q5VYJ5 2156 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 ANK2Q01484 3957 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 DSPPQ9NZW4 1301 aa10.81□□□□□ -0.68
CPSF3-204ENST00000489403 SLC35F4A4IF30 521 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 CDHR4A6H8M9 788 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 NDUFS8O00217 210 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 SDHDO14521 159 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 TM9SF1O15321 606 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 FRS3O43559 492 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 LGI1O95970 557 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 CXCR1P25024 350 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 ACAA2P42765 397 aaKnown RBP10.8□□□□□ -0.68
CPSF3-204ENST00000489403 NR4A2P43354 598 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 GZMKP49863 264 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 SELENOPP49908 381 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 GSTA3Q16772 222 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 TBRG1Q3YBR2 411 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 LIN52Q52LA3 116 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 ZNF836Q6ZNA1 936 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 LINGO2Q7L985 606 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 ABHD12BQ7Z5M8 362 aaPredicted RBP10.8□□□□□ -0.68
CPSF3-204ENST00000489403 PEX5LQ8IYB4 626 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 ZNF440Q8IYI8 595 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 KIRREL3Q8IZU9 778 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 SLC38A2Q96QD8 506 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 OR52E6Q96RD3 313 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 PIMREGQ9BSJ6 248 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 KATNB1Q9BVA0 655 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 PRR14Q9BWN1 585 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 PIF1Q9H611 641 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 SSU72Q9NP77 194 aaKnown RBP10.8□□□□□ -0.68
CPSF3-204ENST00000489403 OBP2BQ9NPH6 170 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 SLC6A13Q9NSD5 602 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 ADPRHL2Q9NX46 363 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 P2RX2Q9UBL9 471 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 KCNS2Q9ULS6 477 aa10.8□□□□□ -0.68
CPSF3-204ENST00000489403 STAB1Q9NY15 2570 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 IGHV4-61A0A0C4DH41 118 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 A8MVM7 634 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 ZNF587BE7ETH6 402 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 RGS16O15492 202 aaPredicted RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 KRT33AO76009 404 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 BCHEP06276 602 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 SRD5A1P18405 259 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 THBS2P35442 1172 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 MVDP53602 400 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 SNRPD2P62316 118 aaKnown RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 SRSF2Q01130 221 aaKnown RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 LRRC74AQ0VAA2 488 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 STX3Q13277 289 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 TMEM225Q6GV28 225 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 WBP2NLQ6ICG8 309 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 FAM166AQ6J272 317 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 NIPAL3Q6P499 406 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 CREB3L2Q70SY1 520 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 CADM2Q8N3J6 435 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 ANKS4BQ8N8V4 417 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 OR52P1PQ8NH57 321 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 MSI2Q96DH6 328 aaKnown RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 VRK1Q99986 396 aaPredicted RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 TAPBPLQ9BX59 468 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 NELFAQ9H3P2 528 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 CHODLQ9H9P2 273 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 SEC61A2Q9H9S3 476 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms