RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF300Q96RE9 604 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-207ENST00000488591 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
CXCL12-207ENST00000488591 CRIM1Q9NZV1 1036 aa13.39□□□□□ -0.27
CXCL12-207ENST00000488591 ING1Q9UK53 422 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-207ENST00000488591 NOSIPQ9Y314 301 aaKnown RBP13.39□□□□□ -0.27
CXCL12-207ENST00000488591 TRAV36DV7A0A075B6V5 113 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 TRAPPC13A5PLN9 417 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 AQP7P3A6NL99 342 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 ZNF716A6NP11 495 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 CASKO14936 926 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 CHP2O43745 196 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 AKR7A3O95154 331 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 EPXP11678 715 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 PRF1P14222 555 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 UGT2B10P36537 528 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 SLC16A1P53985 500 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 MFSD13AQ14CX5 517 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 NPTX1Q15818 432 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 PGAM4Q8N0Y7 254 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 FITM2Q8N6M3 262 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 TMEM99Q8N816 258 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 ADAMTS16Q8TE57 1224 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 FAM162AQ96A26 154 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 KTI12Q96EK9 354 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-207ENST00000488591 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 DACH2Q96NX9 599 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 TMEM43Q9BTV4 400 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 SF3B5Q9BWJ5 86 aaKnown RBP13.38□□□□□ -0.27
CXCL12-207ENST00000488591 POLR2J2Q9GZM3 115 aaKnown RBP13.38□□□□□ -0.27
CXCL12-207ENST00000488591 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 POLR2J3Q9H1A7 115 aaKnown RBP13.38□□□□□ -0.27
CXCL12-207ENST00000488591 PARPBPQ9NWS1 579 aa13.38□□□□□ -0.27
CXCL12-207ENST00000488591 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-207ENST00000488591 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 SH3D21A4FU49 640 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 ZNF814B7Z6K7 855 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 MRPL33O75394 65 aaKnown RBP13.37□□□□□ -0.27
CXCL12-207ENST00000488591 VAMP5O95183 116 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 ZNF682O95780 498 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 IFNA8P32881 189 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 OR3A2P47893 321 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 EGR4Q05215 589 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 FAM69AQ5T7M9 428 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
CXCL12-207ENST00000488591 TFAP2EQ6VUC0 442 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 GPAT4Q86UL3 456 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 RBM45Q8IUH3 476 aaKnown RBP13.37□□□□□ -0.27
CXCL12-207ENST00000488591 OR4D11Q8NGI4 311 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 OR6S1Q8NH40 331 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 BCAS4Q8TDM0 211 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 APH1AQ96BI3 265 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 MPP4Q96JB8 637 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 MED18Q9BUE0 208 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 HDHD5Q9BXW7 423 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 MCCC2Q9HCC0 563 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 GMPR2Q9P2T1 348 aaKnown RBP13.37□□□□□ -0.27
CXCL12-207ENST00000488591 SLC7A7Q9UM01 511 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 RASD1Q9Y272 281 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 GPR52Q9Y2T5 361 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
CXCL12-207ENST00000488591 RAMP1O60894 148 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 CNOT4O95628 575 aaKnown RBP13.36□□□□□ -0.27
CXCL12-207ENST00000488591 PPP3CBP16298 524 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 GGT1P19440 569 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 OR1E2P47887 323 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 TAS2R41P59536 307 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 SLC17A1Q14916 467 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 DAZAP2Q15038 168 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-207ENST00000488591 P2RY6Q15077 328 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
CXCL12-207ENST00000488591 GLYATQ6IB77 296 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 DEF8Q6ZN54 512 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 FKBP9P1Q75LS8 142 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 TMEM200AQ86VY9 491 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 P3H2Q8IVL5 708 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 UBE2J2Q8N2K1 259 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 C10orf53Q8N6V4 93 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 OR9K2Q8NGE7 335 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 TAAR8Q969N4 342 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 SLC41A3Q96GZ6 507 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 CDRT15Q96T59 188 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 PTDSS2Q9BVG9 487 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 ASPNQ9BXN1 380 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 ZNF226Q9NYT6 803 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 RPS6KA6Q9UK32 745 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 FLVCR1Q9Y5Y0 555 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 MPDZO75970 2070 aa13.36□□□□□ -0.27
CXCL12-207ENST00000488591 IGKV1D-42A0A075B6H8 117 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 B2RBV5 119 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 FTCDNL1E5RQL4 147 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 GOSR1O95249 250 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 ADAP00813 363 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 SERPINA1P01009 418 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 IFNW1P05000 195 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 TNFRSF1BP20333 461 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 SPATS1Q496A3 300 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 FBXW10Q5XX13 1052 aa13.35□□□□□ -0.27
CXCL12-207ENST00000488591 CASP12Q6UXS9 341 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms