RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 TAPBPLQ9BX59 468 aa18.38■□□□□ 0.53
NECAB3-213ENST00000488489 HCAR1Q9BXC0 346 aa18.38■□□□□ 0.53
NECAB3-213ENST00000488489 OR51E2Q9H255 320 aa18.38■□□□□ 0.53
NECAB3-213ENST00000488489 C12orf10Q9HB07 376 aa18.38■□□□□ 0.53
NECAB3-213ENST00000488489 MRPS18AQ9NVS2 196 aaKnown RBP18.38■□□□□ 0.53
NECAB3-213ENST00000488489 LOC100506127A0A0U1RQW1 187 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 FBXO45P0C2W1 286 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 MTNR1AP48039 350 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 RGS6P49758 472 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 CDH11P55287 796 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 KCNJ8Q15842 424 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 EXT1Q16394 746 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 ZNF74Q16587 644 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 C3orf38Q5JPI3 329 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 NXNL2Q5VZ03 156 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 PLBD1Q6P4A8 553 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 PAQR6Q6TCH4 344 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 ZNF367Q7RTV3 350 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 PARP16Q8N5Y8 322 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 FAM83FQ8NEG4 500 aaPredicted RBP18.37■□□□□ 0.53
NECAB3-213ENST00000488489 C9orf43Q8TAL5 461 aaPredicted RBP18.37■□□□□ 0.53
NECAB3-213ENST00000488489 MED20Q9H944 212 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 ZNF160Q9HCG1 818 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 MMP25Q9NPA2 562 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 CMC2Q9NRP2 79 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 ZNF337Q9Y3M9 751 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 MUC6Q6W4X9 2439 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 MCIDASD6RGH6 385 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 CDC40O60508 579 aaKnown RBP eCLIP18.37■□□□□ 0.536e-7■■□□□ 13.7
NECAB3-213ENST00000488489 ITGA10O75578 1167 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 IGF2P01344 180 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 RPS4XP62701 263 aaKnown RBP18.37■□□□□ 0.53
NECAB3-213ENST00000488489 CXXC5Q7LFL8 322 aaKnown RBP18.37■□□□□ 0.53
NECAB3-213ENST00000488489 PPP1R32Q7Z5V6 425 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 MISPQ8IVT2 679 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 SLC22A8Q8TCC7 542 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 PTP4A1Q93096 173 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 OTULINQ96BN8 352 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 NPAS1Q99742 590 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 NCDNQ9UBB6 729 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 PEX16Q9Y5Y5 336 aa18.37■□□□□ 0.53
NECAB3-213ENST00000488489 A0A1W2PQ72 361 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 NDUFB2O95178 105 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 PEPDP12955 493 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 GP1BBP13224 206 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 SLC6A6P31641 620 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 PTGDSP41222 190 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 C17orf67Q0P5P2 114 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 NTRK2Q16620 822 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 C1QL3Q5VWW1 255 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 B3GLCTQ6Y288 498 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 NDUFAF7Q7L592 441 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 SHFQ7M4L6 423 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 AKAP14Q86UN6 197 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 M1APQ8TC57 530 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 CENPOQ9BU64 300 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 RNF167Q9H6Y7 350 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 FAM86C1Q9NVL1 165 aa18.36■□□□□ 0.53
NECAB3-213ENST00000488489 DIMT1Q9UNQ2 313 aaKnown RBP18.36■□□□□ 0.53
NECAB3-213ENST00000488489 LSM2Q9Y333 95 aaKnown RBP18.36■□□□□ 0.53
NECAB3-213ENST00000488489 ZFHX2Q9C0A1 2572 aaPredicted RBP18.36■□□□□ 0.53
NECAB3-213ENST00000488489 NSG1A0A0A6YYJ2 146 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 ZC3H12DA2A288 527 aaKnown RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 SNTNA6NMZ2 147 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 CXCR1P25024 350 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 SOX3P41225 446 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 RAB40BQ12829 278 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 MED22Q15528 200 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 LIPHQ8WWY8 451 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 TAAR8Q969N4 342 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 SPACA9Q96E40 222 aaPredicted RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 DNAJA3Q96EY1 480 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 MED11Q9P086 117 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 CHRNA9Q9UGM1 479 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 FARSAQ9Y285 508 aaKnown RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 ADAM18Q9Y3Q7 739 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 CNOT1A5YKK6 2376 aaKnown RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 EML6Q6ZMW3 1958 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 SNPHO15079 494 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 GSTT2P0CG29 244 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 GSTT2BP0CG30 244 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 OTX2P32243 289 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 ETV6P41212 452 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 EIF3IQ13347 325 aaKnown RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 ZNF791Q3KP31 576 aaPredicted RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 KLHL22Q53GT1 634 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 SOWAHCQ53LP3 525 aaPredicted RBP18.35■□□□□ 0.53
NECAB3-213ENST00000488489 ADGRG3Q86Y34 549 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 C10orf53Q8N6V4 93 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 RFKQ969G6 155 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 NACC2Q96BF6 587 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 CHCHD6Q9BRQ6 235 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 FN3KQ9H479 309 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 NANSQ9NR45 359 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 TAS2R10Q9NYW0 307 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 KLRF1Q9NZS2 232 aa18.35■□□□□ 0.53
NECAB3-213ENST00000488489 ALPK2Q86TB3 2170 aa18.34■□□□□ 0.53
NECAB3-213ENST00000488489 RAB36O95755 333 aa18.34■□□□□ 0.53
NECAB3-213ENST00000488489 CD63P08962 238 aa18.34■□□□□ 0.53
NECAB3-213ENST00000488489 RAB40ALP0C0E4 278 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms