RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 POMZP3Q6PJE2 187 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 IGFN1Q86VF2 1251 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 WDSUB1Q8N9V3 476 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 PSMF1Q92530 271 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 KISS1RQ969F8 398 aaPredicted RBP8.55□□□□□ -1.04
SF3B1-211ENST00000487698 RNFT2Q96EX2 444 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 CRELD1Q96HD1 420 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 PROK2Q9HC23 129 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 ASCL3Q9NQ33 180 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 IL17BQ9UHF5 180 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 ENPP5Q9UJA9 477 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 ADAM18Q9Y3Q7 739 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 SLC25A12O75746 678 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 RAB36O95755 333 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 CEACAM1P13688 526 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 APEHP13798 732 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF3P17036 446 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 HK1P19367 917 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 SLC2A5P22732 501 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 PCSK6P29122 969 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 AQP2P41181 271 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FOXF1Q12946 379 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ITGADQ13349 1161 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 CRMP1Q14194 572 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 INPP5JQ15735 1006 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FAM69AQ5T7M9 428 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 PRAMEF20Q5VT98 475 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 C1orf140Q5VVS0 124 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 B3GNT6Q6ZMB0 384 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF367Q7RTV3 350 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FAM122BQ7Z309 247 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 NANOGNBQ7Z5D8 188 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 C10orf53Q8N6V4 93 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 SLC37A3Q8NCC5 494 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 OR6S1Q8NH40 331 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 POC1BQ8TC44 478 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 RAB2BQ8WUD1 216 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 PTP4A1Q93096 173 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 MRGPRX4Q96LA9 322 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ERMAPQ96PL5 475 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 MED20Q9H944 212 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 WARS2Q9UGM6 360 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FBXL2Q9UKC9 423 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 VDAC3Q9Y277 283 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 EXOGQ9Y2C4 368 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 CNTRLQ7Z7A1 2325 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ANKRD33BA6NCL7 494 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 CCDC182A6NF36 153 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FTCDNL1E5RQL4 147 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 PRR23D1E9PI22 279 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF208O43345 1280 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 IDH3BO43837 385 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FZD7O75084 574 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 GABARAPO95166 117 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 IFNGP01579 166 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 PRR23D2P0DMB1 279 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 HIST1H1CP16403 213 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 NOS3P29474 1203 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 RPL4P36578 427 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 LIPAP38571 399 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF41P51814 821 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 MAP2K6P52564 334 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 RPL18Q07020 188 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 TIGD6Q17RP2 521 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 ACER2Q5QJU3 275 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 B3GNTL1Q67FW5 361 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 JMJD6Q6NYC1 403 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 MEPCEQ7L2J0 689 aaKnown RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 TMEM156Q8N614 296 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 SIRT6Q8N6T7 355 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 NANOGP1Q8N7R0 232 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 C1GALT1C1Q96EU7 318 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 SGCZQ96LD1 299 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 OR5M11Q96RB7 305 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 DDOQ99489 341 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 KATNB1Q9BVA0 655 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 JAM3Q9BX67 310 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 OR11A1Q9GZK7 315 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 CXorf56Q9H5V9 222 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 GPN2Q9H9Y4 310 aaPredicted RBP8.54□□□□□ -1.04
SF3B1-211ENST00000487698 HPF1Q9NWY4 346 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 CLEC2DQ9UHP7 191 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 KLHL21Q9UJP4 597 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 SLC6A5Q9Y345 797 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 IER3IP1Q9Y5U9 82 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 NCKAP5O14513 1909 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 FREM3P0C091 2139 aa8.54□□□□□ -1.04
SF3B1-211ENST00000487698 BLOC1S5-TXNDC5H3BN57 136 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 J3QRE1 110 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 SNPHO15079 494 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 EFNA2O43921 213 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ATE1O95260 518 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 TXNDC12O95881 172 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 IGHA1P01876 353 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 CD14P08571 375 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ERVK-25P63136 954 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 TMED1Q13445 227 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms