RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PRKDCP78527 4128 aaKnown RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 LIPT2A6NK58 231 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 AQP7P3A6NL99 342 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 RGS9O75916 674 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 SNUPNO95149 360 aaKnown RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 AKR7A3O95154 331 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 SHBGP04278 402 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 PRPS1L1P21108 318 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 TACR3P29371 465 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 SELENOPP49908 381 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 KHKP50053 298 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 POLR2HP52434 150 aaKnown RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 KCNJ10P78508 379 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 WHAMMP3Q1A5X7 153 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 OR4F3Q6IEY1 312 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 TNFAIP8L2Q6P589 184 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 C1orf229Q6ZS94 237 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 CARM1Q86X55 608 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 ARFGAP2Q8N6H7 521 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 MAGEE2Q8TD90 523 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 UBASH3BQ8TF42 649 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 ROPN1LQ96C74 230 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 NAA11Q9BSU3 229 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 SF3B5Q9BWJ5 86 aaKnown RBP13.26□□□□□ -0.29
MCF2L-228ENST00000487354 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 TMEM45AQ9NWC5 275 aa13.26□□□□□ -0.29
MCF2L-228ENST00000487354 A0A096LPE4 126 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 IGHV2OR16-5A0A0B4J2B6 119 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 FAAHO00519 579 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 WNT9BO14905 357 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 TRIM13O60858 407 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 UPK3AO75631 287 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 G6PDP11413 515 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 SLC1A3P43003 542 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 HTR3AP46098 478 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 ARFIP2P53365 341 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 HILS1P60008 231 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 ACTG1P63261 375 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 ADRM1Q16186 407 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 EPHX4Q8IUS5 362 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 FAM169BQ8N8A8 192 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 CCDC63Q8NA47 563 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 OR4F15Q8NGB8 312 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 AGR3Q8TD06 166 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 FAM216AQ8WUB2 273 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 WDR60Q8WVS4 1066 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 DDIT4LQ96D03 193 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 KCNS3Q9BQ31 491 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 PIF1Q9H611 641 aa13.25□□□□□ -0.29
MCF2L-228ENST00000487354 B4DSR2 109 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 ZNF587BE7ETH6 402 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 NPHS1O60500 1241 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 SKAP2O75563 359 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-228ENST00000487354 IFNGR1P15260 489 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 NPR2P20594 1047 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 RPS4Y1P22090 263 aaKnown RBP13.24□□□□□ -0.29
MCF2L-228ENST00000487354 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 CCT5P48643 541 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 OR7A5Q15622 319 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 ELFN2Q5R3F8 820 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 SAXO2Q658L1 398 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 SPATA21Q7Z572 469 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 GLCCI1Q86VQ1 547 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 C4orf33Q8N1A6 199 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 FNDC5Q8NAU1 212 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 CLDND2Q8NHS1 167 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 CKAP2Q8WWK9 683 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 XAGE5Q8WWM1 108 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 MECRQ9BV79 373 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 SLC38A1Q9H2H9 487 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 EXD2Q9NVH0 621 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 HIF1ANQ9NWT6 349 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 PCDHB14Q9Y5E9 798 aa13.24□□□□□ -0.29
MCF2L-228ENST00000487354 TMEM229AB2RXF0 380 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 RNASET2O00584 256 aaKnown RBP13.23□□□□□ -0.29
MCF2L-228ENST00000487354 COPEO14579 308 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 AVPP01185 164 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 CHRM4P08173 479 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 ADRA2AP08913 450 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 CLDN8P56748 225 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 UBE2NP61088 152 aaKnown RBP13.23□□□□□ -0.29
MCF2L-228ENST00000487354 POU3F1Q03052 451 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-228ENST00000487354 EPS8Q12929 822 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 PGS1Q32NB8 556 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 CREB3L2Q70SY1 520 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 ABHD12BQ7Z5M8 362 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-228ENST00000487354 PEG10Q86TG7 708 aaKnown RBP13.23□□□□□ -0.29
MCF2L-228ENST00000487354 GPAT4Q86UL3 456 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 ANKRD46Q86W74 232 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 CNPY4Q8N129 248 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 PMM1Q92871 262 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 TMEM186Q96B77 213 aa13.23□□□□□ -0.29
MCF2L-228ENST00000487354 ZNF317Q96PQ6 595 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-228ENST00000487354 PRPF18Q99633 342 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms