RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF837Q96EG3 531 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 MS4A7Q9GZW8 240 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 LAT2Q9GZY6 243 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 SIRT3Q9NTG7 399 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 AURKAIP1Q9NWT8 199 aaPredicted RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 PURGQ9UJV8 347 aaKnown RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 HDGFL3Q9Y3E1 203 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF587BE7ETH6 402 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 H0YL77 283 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 PDPK1O15530 556 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 TRAF3IP2O43734 574 aaPredicted RBP12.88□□□□□ -0.35
U2AF1-211ENST00000486519 NDUFA7O95182 113 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 HMGN2P05204 90 aaKnown RBP12.88□□□□□ -0.35
U2AF1-211ENST00000486519 UBTFL6P0CB48 400 aaPredicted RBP12.88□□□□□ -0.35
U2AF1-211ENST00000486519 ATP6V1C1P21283 382 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 RAD52P43351 418 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 PROK1P58294 105 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 PLAURQ03405 335 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF154Q13106 437 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 DCST2Q5T1A1 773 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 TMEM99Q8N816 258 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 GLB1L3Q8NCI6 653 aaPredicted RBP12.88□□□□□ -0.35
U2AF1-211ENST00000486519 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
U2AF1-211ENST00000486519 VPS11Q9H270 941 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 PIGUQ9H490 435 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 MARCH7Q9H992 704 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 TMEM181Q9P2C4 612 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
U2AF1-211ENST00000486519 DNPH1O43598 174 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 SHOX2O60902 331 aaPredicted RBP12.87□□□□□ -0.35
U2AF1-211ENST00000486519 ULK1O75385 1050 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 KRT33AO76009 404 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 CLPTM1O96005 669 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 KRT6AP02538 564 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 KRT6BP04259 564 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 KRT6CP48668 564 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
U2AF1-211ENST00000486519 MRPS25P82663 173 aaKnown RBP12.87□□□□□ -0.35
U2AF1-211ENST00000486519 ARF1P84077 181 aaKnown RBP12.87□□□□□ -0.35
U2AF1-211ENST00000486519 CLCQ05315 142 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 SPDYAQ5MJ70 313 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF362Q5T0B9 420 aaPredicted RBP12.87□□□□□ -0.35
U2AF1-211ENST00000486519 RUSC1-AS1Q66K80 236 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 KLC3Q6P597 504 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 SYT10Q6XYQ8 523 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 LINC01006Q8NI28 216 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 ARL8AQ96BM9 186 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 GAL3ST1Q99999 423 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 CHIAQ9BZP6 476 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 DUSP22Q9NRW4 184 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 SLC6A13Q9NSD5 602 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 UBAP1Q9NZ09 502 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 DUSP13Q9UII6 198 aa12.87□□□□□ -0.35
U2AF1-211ENST00000486519 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 CCDC189A1A4V9 331 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 A8MT66 165 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 NPIPB8E9PQR5 432 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 CLPXO76031 633 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 AKR7A3O95154 331 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF35P13682 527 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF12P17014 697 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 FOXA1P55317 472 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 ROR2Q01974 943 aaKnown RBP12.86□□□□□ -0.35
U2AF1-211ENST00000486519 FXNQ16595 210 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 DEFB112Q30KQ8 113 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 UNC50Q53HI1 259 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 REP15Q6BDI9 236 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 PAQR6Q6TCH4 344 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 KLHL7Q8IXQ5 586 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 METTL6Q8TCB7 284 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF75AQ96N20 296 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 STACQ99469 402 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 HOXD1Q9GZZ0 328 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 ZNF385DQ9H6B1 395 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 SEC14L4Q9UDX3 406 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 KLHL21Q9UJP4 597 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 NFU1Q9UMS0 254 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 SNX24Q9Y343 169 aa12.86□□□□□ -0.35
U2AF1-211ENST00000486519 TENM2Q9NT68 2774 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 IGHV1-69-2A0A0G2JMI3 117 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 AKAP10O43572 662 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 HMOX2P30519 316 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 RYKP34925 604 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 GLRXP35754 106 aa12.85□□□□□ -0.35
U2AF1-211ENST00000486519 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
U2AF1-211ENST00000486519 FRKP42685 505 aaPredicted RBP12.85□□□□□ -0.35
U2AF1-211ENST00000486519 CRYBB2P43320 205 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms