RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 CDC73Q6P1J9 531 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 R3HCC1LQ7Z5L2 792 aaKnown RBP8.17□□□□□ -1.1
PTPN7-213ENST00000486116 ABHD12BQ7Z5M8 362 aaPredicted RBP8.17□□□□□ -1.1
PTPN7-213ENST00000486116 MDP1Q86V88 176 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 SGCDQ92629 289 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 CDS1Q92903 461 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 TRIM44Q96DX7 344 aaPredicted RBP8.17□□□□□ -1.1
PTPN7-213ENST00000486116 PHF21BQ96EK2 531 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 GPR78Q96P69 363 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 MS4A4EQ96PG1 132 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 CCDC106Q9BWC9 280 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 CTPS2Q9NRF8 586 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 ACER3Q9NUN7 267 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 TXNDC16Q9P2K2 825 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 CHRNA9Q9UGM1 479 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.17□□□□□ -1.1
PTPN7-213ENST00000486116 HDGFL3Q9Y3E1 203 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 HERC2O95714 4834 aa8.17□□□□□ -1.1
PTPN7-213ENST00000486116 TMEM229AB2RXF0 380 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 E7ESA3 106 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 TP73O15350 636 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 UPK3AO75631 287 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 KRT33AO76009 404 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 RSL1D1O76021 490 aaKnown RBP8.16□□□□□ -1.1
PTPN7-213ENST00000486116 OR4F21O95013 312 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 PPP1R3DO95685 299 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 IGHMP01871 453 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 IMPDH2P12268 514 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 BCKDHAP12694 445 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
PTPN7-213ENST00000486116 SSTR1P30872 391 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 NUP214P35658 2090 aaPredicted RBP8.16□□□□□ -1.1
PTPN7-213ENST00000486116 GLRXP35754 106 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 ARR3P36575 388 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 SELENOPP49908 381 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 HTR6P50406 440 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF75DP51815 510 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 ATP12AP54707 1039 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 ARL4CP56559 192 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 FXNQ16595 210 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 PAQR6Q6TCH4 344 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 SZRD1Q7Z422 152 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 OR9K2Q8NGE7 335 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 OR52E2Q8NGJ4 325 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 ST7LQ8TDW4 575 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 MS4A3Q96HJ5 214 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 SLC30A2Q9BRI3 323 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 MRI1Q9BV20 369 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 HOXD1Q9GZZ0 328 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 VPS11Q9H270 941 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 UBAP1Q9NZ09 502 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 GRHL1Q9NZI5 618 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 TMEM181Q9P2C4 612 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF346Q9UL40 294 aaKnown RBP8.16□□□□□ -1.1
PTPN7-213ENST00000486116 POLR3KQ9Y2Y1 108 aaPredicted RBP8.16□□□□□ -1.1
PTPN7-213ENST00000486116 DTNAQ9Y4J8 743 aa8.16□□□□□ -1.1
PTPN7-213ENST00000486116 SPIN1Q9Y657 262 aaPredicted RBP8.16□□□□□ -1.1
PTPN7-213ENST00000486116 TRAV40A0A0B4J280 105 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 A0A1W2PPW3 197 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 CCDC189A1A4V9 331 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 FAM159BA6NKW6 160 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 C17orf100A8MU93 164 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 STX16-NPEPL1H3BU86 382 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 K7EIL1 84 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 STX16O14662 325 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 DHHO43323 396 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 MPIG6BO95866 241 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 OTCP00480 354 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 RPS17P08708 135 aaKnown RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF35P13682 527 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ATP6V1C1P21283 382 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 SPRP35270 261 aaPredicted RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 APOBEC1P41238 236 aaKnown RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 GSTM5P46439 218 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 CDH13P55290 713 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ARF1P84077 181 aaKnown RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 BTKQ06187 659 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 FAM83EQ2M2I3 478 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 MMEL1Q495T6 779 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 GLIPR1L2Q4G1C9 344 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 FAM205BPQ63HN1 556 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 USP51Q70EK9 711 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ZBED8Q8IZ13 594 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 IL17RDQ8NFM7 739 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF483Q8TF39 744 aaPredicted RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 TMEM234Q8WY98 164 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 CDKL2Q92772 493 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 RAB1CQ92928 201 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ZDHHC16Q969W1 377 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 CIDECQ96AQ7 238 aaPredicted RBP8.15□□□□□ -1.1
PTPN7-213ENST00000486116 PHF21AQ96BD5 680 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 TIMD4Q96H15 378 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 LAT2Q9GZY6 243 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 ACSS3Q9H6R3 686 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 FN3KRPQ9HA64 309 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 SIRT5Q9NXA8 310 aa8.15□□□□□ -1.1
PTPN7-213ENST00000486116 DUSP13Q9UII6 198 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms